Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KJP55_RS19045 Genome accession   NZ_OX419569
Coordinates   3612740..3613453 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis isolate NRS6118     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3607740..3618453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP55_RS19025 (NRS6118_18870) yvcT 3607884..3608861 (+) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -
  KJP55_RS19030 (NRS6118_18875) psdB 3608899..3610839 (-) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  KJP55_RS19035 (NRS6118_18880) psdA 3610814..3611593 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  KJP55_RS19040 (NRS6118_18885) psdS 3611676..3612746 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  KJP55_RS19045 (NRS6118_18890) braR 3612740..3613453 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  KJP55_RS19050 (NRS6118_18895) yvzJ 3613600..3613809 (+) 210 WP_003243327.1 lipoprotein -
  KJP55_RS19055 (NRS6118_18900) yvcN 3613845..3614609 (-) 765 WP_009968228.1 arylamine N-acetyltransferase -
  KJP55_RS19060 (NRS6118_18905) crh 3614610..3614867 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  KJP55_RS19065 (NRS6118_18910) whiA 3614891..3615841 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  KJP55_RS19070 (NRS6118_18915) mgfK 3615864..3616817 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  KJP55_RS19075 (NRS6118_18920) rapZ 3616819..3617706 (-) 888 WP_003243903.1 RNase adapter RapZ -
  KJP55_RS19080 (NRS6118_18925) yvcI 3617731..3618207 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=1040355 KJP55_RS19045 WP_003244535.1 3612740..3613453(-) (braR) [Bacillus subtilis isolate NRS6118]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1040355 KJP55_RS19045 WP_003244535.1 3612740..3613453(-) (braR) [Bacillus subtilis isolate NRS6118]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCTGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment