Detailed information NTG0104033

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QUE67_RS08455
• Genome accession: NZ_AP028141
• Coordinates: 1675116..1676021 (+)
• Length: 301 a.a.
• NCBI ID: WP_286226741.1
• Uniprot ID: -
• Organism: Polynucleobacter sp. HIN10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1670116..1681021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE67_RS08425 (PHIN10_16280)	pth	1670281..1670871 (+)	591	WP_286223593.1	aminoacyl-tRNA hydrolase	-
QUE67_RS08430 (PHIN10_16290)	-	1670877..1671137 (-)	261	WP_286223594.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QUE67_RS08435 (PHIN10_16300)	coaD	1671170..1671661 (-)	492	WP_286223595.1	pantetheine-phosphate adenylyltransferase	-
QUE67_RS08440 (PHIN10_16310)	rsmD	1671696..1672286 (-)	591	WP_286226738.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QUE67_RS08445 (PHIN10_16320)	-	1672287..1673627 (-)	1341	WP_286226739.1	pitrilysin family protein	-
QUE67_RS08450 (PHIN10_16330)	-	1673639..1675024 (-)	1386	WP_286308585.1	pitrilysin family protein	-
QUE67_RS08455 (PHIN10_16340)	pilA	1675116..1676021 (+)	906	WP_286226741.1	signal recognition particle-docking protein FtsY	Machinery gene
QUE67_RS08460 (PHIN10_16350)	rpoH	1676139..1677044 (+)	906	WP_353506037.1	RNA polymerase sigma factor RpoH	-
QUE67_RS08465 (PHIN10_16360)	-	1677048..1677620 (-)	573	WP_286223600.1	SCO family protein	-
QUE67_RS08470 (PHIN10_16370)	cyoE	1677624..1678508 (-)	885	WP_286223601.1	heme o synthase	-
QUE67_RS08475 (PHIN10_16380)	-	1678505..1679629 (-)	1125	WP_286226742.1	COX15/CtaA family protein	-
QUE67_RS08480 (PHIN10_16390)	-	1679626..1680279 (-)	654	WP_286223603.1	hypothetical protein	-
QUE67_RS08485 (PHIN10_16400)	-	1680293..1681009 (-)	717	WP_286226743.1	SURF1 family protein	-

Sequence

Protein

• Length: 301 a.a.
• Molecular weight: 32336.89 Da
• Isoelectric Point: 6.9754

>NTDB_id=104033 QUE67_RS08455 WP_286226741.1 1675116..1676021(+) (pilA) [Polynucleobacter sp. HIN10]
MFGLRKTLSSLFTRNRVDEAWFDHLEELLIKADVGVSTSTALIASLRKSAKQHSITNSEDLKAVLVDELSHLLSDLESPE
NPLSPSATHPKPEVWLIVGVNGAGKTTSIGKLCHHFQAQGKSVLLAAGDTFRAAARNQLKEWGERNQVQVLSQESGDAGA
IAHDAIQAALSRQVDVVLIDTAGRLATQANLMEELKKVKRVISKLIPDAPHQIVLVLDGNTGQNGIAQVLAFRNAIGLHG
LIVTKLDGTAKGGVICALRNELQSSSQTQGPKTYVYALGKGEQLGDLELFSAKAYAQELVE

Nucleotide

• Length: 906 bp

>NTDB_id=104033 QUE67_RS08455 WP_286226741.1 1675116..1676021(+) (pilA) [Polynucleobacter sp. HIN10]
ATGTTTGGTTTACGTAAAACACTTAGCTCACTCTTTACTCGTAACCGAGTGGATGAAGCCTGGTTCGATCATTTAGAAGA
ATTACTGATCAAAGCCGATGTTGGTGTTTCGACATCAACCGCTCTAATAGCTAGTCTACGCAAATCGGCCAAACAGCATT
CCATTACAAATTCTGAGGATTTAAAGGCAGTTCTAGTTGATGAGCTCAGCCATCTTTTGAGTGACTTAGAGTCCCCAGAA
AATCCTTTAAGCCCAAGTGCTACGCATCCTAAGCCAGAAGTTTGGCTAATTGTAGGGGTCAATGGTGCTGGCAAAACCAC
ATCGATTGGAAAACTATGTCATCACTTCCAGGCTCAAGGAAAGTCGGTGCTCCTCGCTGCTGGGGATACATTTCGAGCGG
CGGCGCGCAATCAACTCAAGGAATGGGGTGAGCGCAATCAAGTGCAAGTGCTCAGCCAAGAGAGTGGCGATGCTGGCGCG
ATTGCGCATGATGCAATCCAAGCCGCTTTGTCTCGGCAGGTTGACGTTGTACTAATTGATACGGCTGGCCGACTCGCTAC
TCAAGCGAATCTGATGGAGGAATTAAAGAAGGTCAAGCGAGTCATTTCCAAGTTGATCCCCGATGCCCCCCATCAAATTG
TCTTGGTCCTTGATGGCAATACGGGTCAGAATGGAATTGCCCAAGTTTTGGCTTTTCGGAACGCAATTGGACTACACGGC
CTTATCGTCACCAAATTGGATGGCACCGCTAAAGGCGGGGTAATTTGCGCACTTCGCAATGAGTTGCAAAGCTCCTCCCA
AACCCAGGGCCCAAAAACCTATGTTTATGCACTTGGCAAGGGTGAGCAATTAGGTGATTTGGAGCTATTTTCTGCTAAGG
CTTATGCCCAAGAGCTTGTAGAATAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (3-69)

• SRP54-type protein, GTPase domain (SRP54) (92-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.993	99.003	0.485