Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | KJP55_RS08280 | Genome accession | NZ_OX419569 |
| Coordinates | 1572350..1573375 (+) | Length | 341 a.a. |
| NCBI ID | WP_213392175.1 | Uniprot ID | - |
| Organism | Bacillus subtilis isolate NRS6118 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1567350..1578375
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP55_RS08245 (NRS6118_08210) | ylbE | 1567650..1567889 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| KJP55_RS08250 (NRS6118_08215) | ylbF | 1568005..1568454 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| KJP55_RS08255 (NRS6118_08220) | ylbG | 1568509..1568781 (+) | 273 | WP_009967171.1 | YlbG family protein | - |
| KJP55_RS08260 (NRS6118_08225) | rsmD | 1569104..1569658 (+) | 555 | WP_003232227.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| KJP55_RS08265 (NRS6118_08230) | coaD | 1569663..1570148 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| KJP55_RS08270 (NRS6118_08235) | spoVV | 1570159..1571385 (-) | 1227 | WP_003245492.1 | dipicolinic acid transporter SpoVV | - |
| KJP55_RS08275 (NRS6118_08240) | ylbK | 1571566..1572348 (+) | 783 | WP_003232221.1 | patatin family protein | - |
| KJP55_RS08280 (NRS6118_08245) | sepM | 1572350..1573375 (+) | 1026 | WP_213392175.1 | SepM family pheromone-processing serine protease | Regulator |
| KJP55_RS08285 (NRS6118_08250) | ylbM | 1573392..1574639 (-) | 1248 | WP_003244707.1 | nucleotidyltransferase | - |
| KJP55_RS08290 (NRS6118_08255) | - | 1574636..1574821 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| KJP55_RS08295 (NRS6118_08260) | ylbN | 1574849..1575367 (+) | 519 | WP_003232214.1 | DUF177 domain-containing protein | - |
| KJP55_RS08300 (NRS6118_08265) | rpmF | 1575389..1575568 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| KJP55_RS08305 (NRS6118_08270) | gerR | 1575714..1576295 (+) | 582 | WP_003232210.1 | sporulation specific transcriptional regulator GerR | - |
| KJP55_RS08310 (NRS6118_08275) | ylbP | 1576352..1576834 (-) | 483 | WP_003244940.1 | N-acetyltransferase | - |
| KJP55_RS08315 (NRS6118_08280) | - | 1576994..1577890 (+) | 897 | WP_003232206.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37665.26 Da Isoelectric Point: 6.5355
>NTDB_id=1040286 KJP55_RS08280 WP_213392175.1 1572350..1573375(+) (sepM) [Bacillus subtilis isolate NRS6118]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGEKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGEKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=1040286 KJP55_RS08280 WP_213392175.1 1572350..1573375(+) (sepM) [Bacillus subtilis isolate NRS6118]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGAAAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGAAAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |