Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACDZ51_RS07645 Genome accession   NZ_CP167923
Coordinates   1635146..1635772 (+) Length   208 a.a.
NCBI ID   WP_008499926.1    Uniprot ID   A0AAX1WHW5
Organism   Enterobacter roggenkampii strain INCIENSA_724942     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1630146..1640772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDZ51_RS07625 (ACDZ51_07625) - 1630545..1632305 (-) 1761 WP_023327040.1 Lon protease family protein -
  ACDZ51_RS07630 (ACDZ51_07630) matP 1632492..1632944 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  ACDZ51_RS07635 (ACDZ51_07635) ompA 1633009..1634064 (-) 1056 WP_008499928.1 porin OmpA -
  ACDZ51_RS07640 (ACDZ51_07640) sulA 1634419..1634928 (-) 510 WP_375753357.1 SOS-induced cell division inhibitor SulA -
  ACDZ51_RS07645 (ACDZ51_07645) sxy/tfoX 1635146..1635772 (+) 627 WP_008499926.1 TfoX/Sxy family DNA transformation protein Regulator
  ACDZ51_RS07650 (ACDZ51_07650) yccS 1635729..1637891 (-) 2163 WP_375752771.1 YccS family putative transporter -
  ACDZ51_RS07655 (ACDZ51_07655) - 1637911..1638357 (-) 447 WP_008499924.1 YccF domain-containing protein -
  ACDZ51_RS07660 (ACDZ51_07660) helD 1638481..1640535 (+) 2055 WP_375752773.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23885.49 Da        Isoelectric Point: 9.6439

>NTDB_id=1040223 ACDZ51_RS07645 WP_008499926.1 1635146..1635772(+) (sxy/tfoX) [Enterobacter roggenkampii strain INCIENSA_724942]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRTRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1040223 ACDZ51_RS07645 WP_008499926.1 1635146..1635772(+) (sxy/tfoX) [Enterobacter roggenkampii strain INCIENSA_724942]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCGGTCGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCATTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAACCCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCCGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCACTCAGTATAAAAGTGCTCTTTGCGTTGGAAGGAGCTATCGAAGGGCTGCATGAGGCGGCACTCCCGGCAGGTAT
CCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment