Detailed information NTG1040170

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACDW34_RS06835
• Genome accession: NZ_CP167896
• Coordinates: 1438350..1438994 (+)
• Length: 214 a.a.
• NCBI ID: WP_130072596.1
• Uniprot ID: -
• Organism: Acinetobacter piscicola strain p38
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1433350..1443994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDW34_RS06800 (ACDW34_06800)	kdsB	1433681..1434442 (+)	762	WP_180045344.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACDW34_RS06805 (ACDW34_06805)	-	1434461..1435441 (+)	981	WP_372405103.1	DNA polymerase III subunit delta'	-
ACDW34_RS06810 (ACDW34_06810)	-	1435457..1435798 (+)	342	WP_130073031.1	PilZ domain-containing protein	-
ACDW34_RS06815 (ACDW34_06815)	-	1435830..1436603 (+)	774	WP_372404490.1	TatD family hydrolase	-
ACDW34_RS06820 (ACDW34_06820)	-	1436652..1437266 (+)	615	WP_130072600.1	TetR/AcrR family transcriptional regulator	-
ACDW34_RS06825 (ACDW34_06825)	-	1437270..1437836 (+)	567	WP_372404492.1	type II secretion system protein	-
ACDW34_RS06830 (ACDW34_06830)	xcpV	1437946..1438335 (+)	390	WP_130073030.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACDW34_RS06835 (ACDW34_06835)	xcpW	1438350..1438994 (+)	645	WP_130072596.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACDW34_RS06840 (ACDW34_06840)	gspK	1439007..1439954 (+)	948	WP_372404495.1	type II secretion system minor pseudopilin GspK	-
ACDW34_RS06845 (ACDW34_06845)	-	1440161..1440757 (+)	597	WP_130072591.1	6-carboxytetrahydropterin synthase	-
ACDW34_RS06850 (ACDW34_06850)	ung	1440844..1441557 (+)	714	WP_130072588.1	uracil-DNA glycosylase	-
ACDW34_RS06855 (ACDW34_06855)	-	1441554..1442678 (+)	1125	WP_372404498.1	enoyl-CoA hydratase/isomerase family protein	-
ACDW34_RS06860 (ACDW34_06860)	tadA	1442687..1443208 (+)	522	WP_174492893.1	tRNA adenosine(34) deaminase TadA	-
ACDW34_RS06865 (ACDW34_06865)	-	1443265..1443699 (+)	435	WP_130072577.1	SRPBCC family protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24413.82 Da
• Isoelectric Point: 5.0657

>NTDB_id=1040170 ACDW34_RS06835 WP_130072596.1 1438350..1438994(+) (xcpW) [Acinetobacter piscicola strain p38]
MSNQTKTQGFTLIELMVAIAIFAVLAALGWKIFDYLNKVKERNAMHEQNLGQLQEAYQQMQRDTLQIIPVTASMGQQILP
ALQLDQQKLSFSKTGMTDPLKQGLASFERVEYVYSAQDKKLYRLKYSNLNLSAAAQPLSSVLLNDVDQYQVSTLNPNEGE
RWPDENAFNERQLPRGIKIKVMIRDVEYEWIFSLLDTEFLREQTSASTPVNNGS

Nucleotide

• Length: 645 bp

>NTDB_id=1040170 ACDW34_RS06835 WP_130072596.1 1438350..1438994(+) (xcpW) [Acinetobacter piscicola strain p38]
ATGTCTAATCAAACAAAAACACAAGGATTTACATTGATTGAACTGATGGTTGCCATTGCAATCTTTGCTGTTTTGGCGGC
GTTGGGTTGGAAAATTTTTGATTATCTAAATAAAGTCAAAGAACGAAATGCGATGCATGAGCAAAATTTGGGACAACTAC
AAGAAGCATATCAGCAAATGCAACGCGATACCTTGCAAATTATTCCTGTAACAGCGAGTATGGGACAACAAATATTGCCT
GCATTGCAACTCGATCAGCAGAAATTGAGTTTTAGTAAAACAGGGATGACTGATCCTTTGAAGCAGGGACTTGCCAGTTT
TGAGCGCGTTGAATATGTTTATAGCGCACAAGATAAAAAATTATATCGTTTGAAATATAGCAATTTGAATTTATCTGCTG
CTGCACAGCCTTTATCGAGTGTACTGCTCAACGATGTCGATCAATATCAGGTCAGTACGCTAAACCCGAACGAAGGTGAG
CGGTGGCCTGATGAAAATGCCTTTAATGAGCGTCAATTACCACGAGGCATTAAAATTAAAGTGATGATCCGTGATGTTGA
ATATGAGTGGATTTTTAGTTTATTGGATACTGAGTTTTTGCGTGAGCAAACGAGTGCGAGTACACCTGTCAATAATGGAT
CATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-28)

• Type II secretion system (T2SS), protein J (T2SSJ) (60-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.538	91.121	0.561