Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACDW34_RS06830 | Genome accession | NZ_CP167896 |
| Coordinates | 1437946..1438335 (+) | Length | 129 a.a. |
| NCBI ID | WP_130073030.1 | Uniprot ID | - |
| Organism | Acinetobacter piscicola strain p38 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1432946..1443335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDW34_RS06800 (ACDW34_06800) | kdsB | 1433681..1434442 (+) | 762 | WP_180045344.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACDW34_RS06805 (ACDW34_06805) | - | 1434461..1435441 (+) | 981 | WP_372405103.1 | DNA polymerase III subunit delta' | - |
| ACDW34_RS06810 (ACDW34_06810) | - | 1435457..1435798 (+) | 342 | WP_130073031.1 | PilZ domain-containing protein | - |
| ACDW34_RS06815 (ACDW34_06815) | - | 1435830..1436603 (+) | 774 | WP_372404490.1 | TatD family hydrolase | - |
| ACDW34_RS06820 (ACDW34_06820) | - | 1436652..1437266 (+) | 615 | WP_130072600.1 | TetR/AcrR family transcriptional regulator | - |
| ACDW34_RS06825 (ACDW34_06825) | - | 1437270..1437836 (+) | 567 | WP_372404492.1 | type II secretion system protein | - |
| ACDW34_RS06830 (ACDW34_06830) | xcpV | 1437946..1438335 (+) | 390 | WP_130073030.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACDW34_RS06835 (ACDW34_06835) | xcpW | 1438350..1438994 (+) | 645 | WP_130072596.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACDW34_RS06840 (ACDW34_06840) | gspK | 1439007..1439954 (+) | 948 | WP_372404495.1 | type II secretion system minor pseudopilin GspK | - |
| ACDW34_RS06845 (ACDW34_06845) | - | 1440161..1440757 (+) | 597 | WP_130072591.1 | 6-carboxytetrahydropterin synthase | - |
| ACDW34_RS06850 (ACDW34_06850) | ung | 1440844..1441557 (+) | 714 | WP_130072588.1 | uracil-DNA glycosylase | - |
| ACDW34_RS06855 (ACDW34_06855) | - | 1441554..1442678 (+) | 1125 | WP_372404498.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACDW34_RS06860 (ACDW34_06860) | tadA | 1442687..1443208 (+) | 522 | WP_174492893.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 129 a.a. Molecular weight: 14182.30 Da Isoelectric Point: 8.5289
>NTDB_id=1040169 ACDW34_RS06830 WP_130073030.1 1437946..1438335(+) (xcpV) [Acinetobacter piscicola strain p38]
MNRILGFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANAILRTKAQFVAQNQVALMEINQAKLTGTQSEQITSQGETWQ
VDKKAESTISPNIQKIEIQISLYNPETHKVEAGITNAVFFNNPQKNVQS
MNRILGFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANAILRTKAQFVAQNQVALMEINQAKLTGTQSEQITSQGETWQ
VDKKAESTISPNIQKIEIQISLYNPETHKVEAGITNAVFFNNPQKNVQS
Nucleotide
Download Length: 390 bp
>NTDB_id=1040169 ACDW34_RS06830 WP_130073030.1 1437946..1438335(+) (xcpV) [Acinetobacter piscicola strain p38]
TTGAATCGTATTTTAGGGTTTACCCTCATTGAGGTTGTGGTGGCATTGGCAATTTTTGCGGTGGCTGCCATGGCGCTGAC
CAAAGTAGCAATGCAATATACTCAGTCTACAGCAAATGCGATTTTAAGAACAAAAGCGCAATTTGTGGCACAAAATCAAG
TCGCGTTGATGGAAATTAATCAAGCGAAATTGACAGGAACCCAGTCTGAACAAATTACGTCGCAAGGTGAAACCTGGCAA
GTCGATAAAAAAGCTGAAAGCACGATCAGTCCAAACATTCAAAAAATAGAGATCCAAATTAGTTTATATAATCCTGAAAC
TCATAAAGTGGAAGCAGGTATTACCAATGCTGTGTTTTTTAACAATCCACAAAAAAATGTTCAATCCTAG
TTGAATCGTATTTTAGGGTTTACCCTCATTGAGGTTGTGGTGGCATTGGCAATTTTTGCGGTGGCTGCCATGGCGCTGAC
CAAAGTAGCAATGCAATATACTCAGTCTACAGCAAATGCGATTTTAAGAACAAAAGCGCAATTTGTGGCACAAAATCAAG
TCGCGTTGATGGAAATTAATCAAGCGAAATTGACAGGAACCCAGTCTGAACAAATTACGTCGCAAGGTGAAACCTGGCAA
GTCGATAAAAAAGCTGAAAGCACGATCAGTCCAAACATTCAAAAAATAGAGATCCAAATTAGTTTATATAATCCTGAAAC
TCATAAAGTGGAAGCAGGTATTACCAATGCTGTGTTTTTTAACAATCCACAAAAAAATGTTCAATCCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
75.833 |
93.023 |
0.705 |