Detailed information NTG1040140

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: AB8613_RS16290
• Genome accession: NZ_CP167895
• Coordinates: 39100..40194 (-)
• Length: 364 a.a.
• NCBI ID: WP_372385246.1
• Uniprot ID: -
• Organism: Vibrio sp. BS-M-Sm-2
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 34100..45194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8613_RS16270 (AB8613_16270)	-	34854..35162 (+)	309	WP_372385244.1	DUF1289 domain-containing protein	-
AB8613_RS16275 (AB8613_16275)	-	35279..35629 (-)	351	WP_372385245.1	HopJ type III effector protein	-
AB8613_RS16280 (AB8613_16280)	-	35823..36482 (+)	660	WP_060981612.1	PilZ domain-containing protein	-
AB8613_RS16285 (AB8613_16285)	luxQ	36531..39100 (-)	2570	Protein_34	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
AB8613_RS16290 (AB8613_16290)	luxP	39100..40194 (-)	1095	WP_372385246.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
AB8613_RS16295 (AB8613_16295)	-	40503..40817 (-)	315	WP_372385247.1	GIY-YIG nuclease family protein	-
AB8613_RS16300 (AB8613_16300)	-	40818..41474 (-)	657	WP_285953498.1	YceH family protein	-
AB8613_RS16305 (AB8613_16305)	-	41538..41738 (-)	201	WP_017630496.1	hypothetical protein	-
AB8613_RS16310 (AB8613_16310)	-	41934..42248 (+)	315	WP_060981617.1	DUF496 family protein	-
AB8613_RS16315 (AB8613_16315)	-	42418..43044 (+)	627	WP_372385248.1	D-Ala-D-Ala carboxypeptidase family metallohydrolase	-
AB8613_RS16320 (AB8613_16320)	-	43209..43445 (+)	237	WP_372385249.1	hypothetical protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41302.46 Da
• Isoelectric Point: 5.0163

>NTDB_id=1040140 AB8613_RS16290 WP_372385246.1 39100..40194(-) (luxP) [Vibrio sp. BS-M-Sm-2]
MKRLLMLFGLAVFSASALSHGTHVLNGYWEYQDYLSTFPEQKALTDKMVEAVQNHPVPLRRIQDEPITISVVYPGQQISD
YWVRNIQAFEKRLDRLKIRYQINQVFTRINADLAQQSISLQEAIENKTDYLIFTLDTTRHRKFIEHVLTSTDTKLILQNI
TTPVRAWADRQPFMYVGFDHATGSLKLADYFKQVSQPNSQYSVLYYSQGYISDARGDTFIHEVNTDTNFTLKSSFYTKSN
KDSGYQAAKISIENDKDLDFIYACSTDVALGAAEAIRESGQDILVNGWGGGSAELEAIARGDLDVTVMRMNDDTGIAMAE
AIKWDLAGLEVPTVYSGEFEIVTKEDSPERISELKQRAFRYSGQ

Nucleotide

• Length: 1095 bp

>NTDB_id=1040140 AB8613_RS16290 WP_372385246.1 39100..40194(-) (luxP) [Vibrio sp. BS-M-Sm-2]
ATGAAACGTTTACTGATGTTGTTTGGACTTGCTGTATTTTCTGCGTCCGCTCTATCCCATGGTACTCATGTCCTCAATGG
GTACTGGGAATACCAAGATTATCTTTCCACTTTTCCAGAGCAAAAAGCATTGACCGATAAAATGGTCGAGGCTGTACAAA
ATCACCCTGTGCCATTGAGAAGAATCCAAGACGAGCCAATTACGATTTCCGTGGTGTATCCGGGTCAACAAATCTCGGAT
TACTGGGTTCGTAATATTCAAGCTTTTGAGAAGCGTCTCGATAGGCTGAAGATCCGCTACCAAATAAATCAAGTATTTAC
CCGTATTAATGCTGATCTCGCGCAGCAGAGCATTTCATTGCAAGAAGCGATTGAAAACAAGACGGATTATTTGATTTTCA
CGCTAGATACCACGCGCCACCGCAAGTTTATTGAGCACGTGTTGACCTCTACAGATACTAAGTTGATTCTTCAAAACATC
ACAACGCCAGTGCGAGCTTGGGCAGATAGACAGCCATTTATGTATGTGGGTTTTGATCATGCGACAGGCAGTTTAAAACT
GGCGGACTATTTTAAACAAGTAAGCCAACCAAACAGTCAGTATTCTGTTTTGTATTACTCACAAGGCTATATCAGTGATG
CGCGTGGAGATACTTTTATCCATGAAGTGAATACTGATACGAACTTTACCCTTAAGTCTTCGTTTTACACCAAATCAAAC
AAAGACAGTGGCTACCAAGCGGCGAAAATCAGCATAGAGAACGATAAGGATCTAGACTTTATCTATGCATGCTCAACGGA
TGTCGCTCTTGGTGCAGCGGAAGCCATCCGCGAATCGGGTCAAGACATCTTAGTGAATGGTTGGGGAGGCGGCTCTGCTG
AACTTGAAGCCATTGCAAGGGGTGACCTAGATGTTACTGTCATGCGTATGAACGACGACACGGGCATTGCGATGGCAGAG
GCGATCAAGTGGGATCTAGCCGGTTTGGAAGTACCTACCGTTTACTCTGGTGAATTTGAAATTGTGACCAAGGAAGATTC
CCCAGAACGTATTTCAGAACTTAAACAGCGAGCATTTAGGTACTCAGGTCAATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-322)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	63.115	100	0.635