Detailed information NTG1040129

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AB8613_RS11280
• Genome accession: NZ_CP167894
• Coordinates: 2436630..2437670 (+)
• Length: 346 a.a.
• NCBI ID: WP_017056586.1
• Uniprot ID: A0A4V5R5U9
• Organism: Vibrio sp. BS-M-Sm-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2431630..2442670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8613_RS11265 (AB8613_11265)	rpoS	2432189..2433169 (+)	981	WP_017059027.1	RNA polymerase sigma factor RpoS	Regulator
AB8613_RS11270 (AB8613_11270)	mutS	2433310..2435871 (-)	2562	WP_372383830.1	DNA mismatch repair protein MutS	-
AB8613_RS11275 (AB8613_11275)	pncC	2435996..2436490 (+)	495	WP_372384819.1	nicotinamide-nucleotide amidase	-
AB8613_RS11280 (AB8613_11280)	recA	2436630..2437670 (+)	1041	WP_017056586.1	recombinase RecA	Machinery gene
AB8613_RS11285 (AB8613_11285)	alaS	2438003..2440585 (+)	2583	WP_372383831.1	alanine--tRNA ligase	-
AB8613_RS11290 (AB8613_11290)	-	2440806..2441987 (+)	1182	WP_083702796.1	aspartate kinase	-
AB8613_RS11295 (AB8613_11295)	csrA	2442080..2442277 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37342.86 Da
• Isoelectric Point: 4.9043

>NTDB_id=1040129 AB8613_RS11280 WP_017056586.1 2436630..2437670(+) (recA) [Vibrio sp. BS-M-Sm-2]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVALEIDT
KLRELLLTPAVLEEKDVEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=1040129 AB8613_RS11280 WP_017056586.1 2436630..2437670(+) (recA) [Vibrio sp. BS-M-Sm-2]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCTATCATGCG
TCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCCTACCGATGGGACGTATCGTAGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCACAGAAAGTGGGCAAAACGTGTGCATTCGTTGATGCGGAACACGCACTAGACCCTATCTATGCTCAAAAGCTTGG
TGTTGATATCGATGCACTTCTTGTTTCTCAACCAGATACTGGTGAGCAAGCGCTTGAAATCTGTGATGCACTGGCTCGTT
CAGGTGCAATCGACGTTCTTGTTATTGACTCAGTTGCAGCACTAACACCAAAAGCAGAAATCGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTTCAGGCTCGTATGCTTTCTCAAGCGATGCGTAAGCTGACGGGTAACCTAAAGCAGTCTAACTGTAT
GGCTATCTTCATCAACCAAATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCAGAAACAACAACGGGTGGTAACGCGC
TTAAGTTCTACGCATCTGTTCGTCTTGATATCCGCCGTACTGGTGCGATCAAAGATGGTGATGAGGTTGTTGGTAACGAA
ACCCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCGTTTAAACAAGCTGAAACTCAAATCCTATACGGCAAAGGCTT
CAACCGTGAAGGTGAGCTTATCGATTTAGGCGTTAAGAACAAGCTGGTAGAAAAAGCGGGCGCTTGGTACAGCTACAAGG
GCGACAAGATCGGCCAAGGTAAAGCTAACGCTGGTAAATACCTGCGTGAAAACCCAGAGGTTGCTCTAGAGATCGATACT
AAGCTTCGTGAATTGCTACTGACTCCTGCTGTTCTTGAAGAGAAAGACGTAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A4V5R5U9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.97	95.087	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.97	95.087	0.855
recA	Pseudomonas stutzeri DSM 10701	76.133	95.665	0.728
recA	Acinetobacter baumannii D1279779	72.807	98.844	0.72
recA	Acinetobacter baylyi ADP1	71.676	100	0.717
recA	Glaesserella parasuis strain SC1401	67.045	100	0.682
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae strain FA1090	67.241	100	0.676
recA	Ralstonia pseudosolanacearum GMI1000	69.817	94.798	0.662
recA	Streptococcus mutans UA159	58.453	100	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	92.197	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.775	0.584
recA	Streptococcus pneumoniae D39	61.92	93.353	0.578
recA	Streptococcus pneumoniae TIGR4	61.92	93.353	0.578
recA	Streptococcus pneumoniae Rx1	61.92	93.353	0.578
recA	Streptococcus pneumoniae R6	61.92	93.353	0.578
recA	Streptococcus mitis SK321	61.92	93.353	0.578
recA	Helicobacter pylori strain NCTC11637	61.538	93.931	0.578
recA	Helicobacter pylori 26695	61.231	93.931	0.575
recA	Streptococcus mitis NCTC 12261	61.61	93.353	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	58.529	98.266	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.665	0.572
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.775	0.569
recA	Streptococcus pyogenes NZ131	60.308	93.931	0.566
recA	Lactococcus lactis subsp. cremoris KW2	59.443	93.353	0.555