Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACCQ12_RS14365 Genome accession   NZ_CP167863
Coordinates   3393317..3393718 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas sp. NCPPB 1068     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3388317..3398718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCQ12_RS14345 (ACCQ12_14345) - 3389945..3390217 (-) 273 Protein_2800 Hpt domain-containing protein -
  ACCQ12_RS14350 (ACCQ12_14350) - 3390331..3392367 (-) 2037 WP_047697324.1 methyl-accepting chemotaxis protein -
  ACCQ12_RS14355 (ACCQ12_14355) - 3392407..3392937 (-) 531 WP_039413900.1 chemotaxis protein CheW -
  ACCQ12_RS14360 (ACCQ12_14360) - 3392937..3393299 (-) 363 WP_039413898.1 PleD family two-component system response regulator -
  ACCQ12_RS14365 (ACCQ12_14365) pilG 3393317..3393718 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  ACCQ12_RS14370 (ACCQ12_14370) gshB 3393956..3394906 (+) 951 WP_047697318.1 glutathione synthase -
  ACCQ12_RS14375 (ACCQ12_14375) - 3394903..3395778 (+) 876 WP_372382030.1 TonB family protein -
  ACCQ12_RS14380 (ACCQ12_14380) - 3395780..3395995 (-) 216 Protein_2807 ADP-ribosylglycohydrolase family protein -
  ACCQ12_RS14385 (ACCQ12_14385) tsaB 3395992..3396711 (-) 720 WP_372382031.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=1039969 ACCQ12_RS14365 WP_005913706.1 3393317..3393718(-) (pilG) [Xanthomonas sp. NCPPB 1068]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1039969 ACCQ12_RS14365 WP_005913706.1 3393317..3393718(-) (pilG) [Xanthomonas sp. NCPPB 1068]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGGTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTCATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment