Detailed information NTG1039917

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP64_RS01650
• Genome accession: NZ_OX419565
• Coordinates: 297981..299102 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6145
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 292981..304102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP64_RS01625 (NRS6145_01610)	ycdA	292989..294053 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
KJP64_RS01630	-	294076..294207 (-)	132	WP_003246334.1	hypothetical protein	-
KJP64_RS01635 (NRS6145_01615)	ycdB	294381..295799 (+)	1419	WP_213380041.1	YcdB/YcdC domain-containing protein	-
KJP64_RS01640 (NRS6145_01620)	ycdC	295986..297347 (+)	1362	WP_041520542.1	YcdB/YcdC domain-containing protein	-
KJP64_RS01645 (NRS6145_01625)	cwlK	297355..297858 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
KJP64_RS01650 (NRS6145_01630)	rapF	297981..299102 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
KJP64_RS01655 (NRS6145_01635)	ycdF	299209..299985 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
KJP64_RS01660 (NRS6145_01640)	ycdG	300010..301695 (+)	1686	WP_015715202.1	alpha-glucosidase	-
KJP64_RS01665 (NRS6145_01645)	znuA	301883..302842 (+)	960	WP_015715203.1	metal ABC transporter substrate-binding protein	-
KJP64_RS01670 (NRS6145_01650)	znuC	302897..303592 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=1039917 KJP64_RS01650 WP_015715201.1 297981..299102(+) (rapF) [Bacillus subtilis isolate NRS6145]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=1039917 KJP64_RS01650 WP_015715201.1 297981..299102(+) (rapF) [Bacillus subtilis isolate NRS6145]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCTAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGACAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405