Detailed information NTG0103991

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QUE66_RS08470
• Genome accession: NZ_AP028137
• Coordinates: 1705480..1706385 (+)
• Length: 301 a.a.
• NCBI ID: WP_286223599.1
• Uniprot ID: -
• Organism: Polynucleobacter sp. HIN6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1700480..1711385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE66_RS08440 (PHIN6_16370)	pth	1700645..1701235 (+)	591	WP_286223593.1	aminoacyl-tRNA hydrolase	-
QUE66_RS08445 (PHIN6_16380)	-	1701241..1701501 (-)	261	WP_286223594.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QUE66_RS08450 (PHIN6_16390)	coaD	1701534..1702025 (-)	492	WP_286223595.1	pantetheine-phosphate adenylyltransferase	-
QUE66_RS08455 (PHIN6_16400)	rsmD	1702060..1702650 (-)	591	WP_286223596.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QUE66_RS08460 (PHIN6_16410)	-	1702651..1703991 (-)	1341	WP_286223597.1	pitrilysin family protein	-
QUE66_RS08465 (PHIN6_16420)	-	1704003..1705421 (-)	1419	WP_286223598.1	pitrilysin family protein	-
QUE66_RS08470 (PHIN6_16430)	pilA	1705480..1706385 (+)	906	WP_286223599.1	signal recognition particle-docking protein FtsY	Machinery gene
QUE66_RS08475 (PHIN6_16440)	rpoH	1706545..1707408 (+)	864	WP_286224768.1	RNA polymerase sigma factor RpoH	-
QUE66_RS08480 (PHIN6_16450)	-	1707412..1707984 (-)	573	WP_286223600.1	SCO family protein	-
QUE66_RS08485 (PHIN6_16460)	cyoE	1707988..1708872 (-)	885	WP_286223601.1	heme o synthase	-
QUE66_RS08490 (PHIN6_16470)	-	1708869..1709993 (-)	1125	WP_286223602.1	COX15/CtaA family protein	-
QUE66_RS08495 (PHIN6_16480)	-	1709990..1710643 (-)	654	WP_286223603.1	hypothetical protein	-
QUE66_RS08500 (PHIN6_16490)	-	1710657..1711373 (-)	717	WP_286223604.1	SURF1 family protein	-

Sequence

Protein

• Length: 301 a.a.
• Molecular weight: 32350.92 Da
• Isoelectric Point: 6.9754

>NTDB_id=103991 QUE66_RS08470 WP_286223599.1 1705480..1706385(+) (pilA) [Polynucleobacter sp. HIN6]
MFGLRKTLSSLFTRNRVDEAWFDHLEELLIKADVGVSTSTALIASLRKSAKQHSITNSEDLKAVLVDELSHLLSDLESPE
NPLSPSATHPKPEIWLIVGVNGAGKTTSIGKLCHHFQAQGKSVLLAAGDTFRAAARNQLKEWGERNQVQVLSQESGDAGA
IAHDAIQAALSRQVDVVLIDTAGRLATQANLMEELKKVKRVISKLIPDAPHQIVLVLDGNTGQNGIAQVLAFRNAIGLHG
LIVTKLDGTAKGGVICALRNELQSSSQTQGPKTYVYALGKGEQLGDLELFSAKAYAQELVE

Nucleotide

• Length: 906 bp

>NTDB_id=103991 QUE66_RS08470 WP_286223599.1 1705480..1706385(+) (pilA) [Polynucleobacter sp. HIN6]
ATGTTTGGTTTACGTAAAACACTTAGCTCACTCTTTACTCGTAACCGAGTGGATGAAGCCTGGTTCGATCATTTAGAAGA
ATTACTGATCAAAGCCGATGTTGGTGTTTCGACATCAACCGCTCTAATAGCTAGTCTACGCAAATCGGCCAAACAGCATT
CCATTACAAATTCTGAGGATTTAAAGGCAGTTCTAGTTGATGAGCTCAGCCATCTTTTGAGTGACTTAGAGTCCCCAGAA
AATCCTTTAAGCCCAAGTGCTACGCATCCTAAGCCAGAAATTTGGCTAATTGTAGGGGTCAATGGTGCTGGCAAAACCAC
ATCGATTGGAAAACTATGTCATCACTTCCAGGCTCAAGGAAAGTCGGTGCTCCTCGCTGCTGGGGATACATTTCGAGCGG
CGGCGCGCAATCAACTCAAGGAATGGGGTGAGCGCAATCAAGTGCAAGTGCTCAGCCAAGAGAGTGGCGATGCTGGCGCG
ATTGCGCATGATGCTATCCAAGCCGCTTTGTCTCGGCAAGTTGACGTTGTACTAATTGATACGGCTGGCCGACTCGCTAC
TCAAGCGAATCTGATGGAGGAATTAAAGAAGGTCAAGCGAGTCATTTCCAAGTTGATCCCCGATGCCCCCCATCAAATTG
TCTTGGTCCTTGATGGCAATACGGGTCAGAATGGAATTGCCCAAGTTTTGGCTTTTCGGAACGCAATTGGACTACACGGC
CTTATCGTCACCAAATTGGATGGCACCGCTAAAGGCGGGGTAATTTGCGCACTTCGCAATGAGTTGCAAAGCTCCTCCCA
AACCCAGGGCCCAAAAACCTATGTTTATGCACTTGGCAAGGGTGAGCAATTAGGTGATTTGGAGCTATTTTCTGCTAAGG
CTTATGCCCAAGAGCTTGTAGAATAG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (93-300)

• SRP54-type protein, helical bundle domain (SRP54_N) (3-69)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.658	99.003	0.482