Detailed information NTG0103979

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QUE61_RS08845
• Genome accession: NZ_AP028136
• Coordinates: 1758008..1758913 (+)
• Length: 301 a.a.
• NCBI ID: WP_286306861.1
• Uniprot ID: -
• Organism: Polynucleobacter sp. HIN5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1753008..1763913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE61_RS08815 (PHIN5_17190)	pth	1753173..1753763 (+)	591	WP_286306855.1	aminoacyl-tRNA hydrolase	-
QUE61_RS08820 (PHIN5_17200)	-	1753769..1754029 (-)	261	WP_286306856.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QUE61_RS08825 (PHIN5_17210)	coaD	1754062..1754553 (-)	492	WP_286306857.1	pantetheine-phosphate adenylyltransferase	-
QUE61_RS08830 (PHIN5_17220)	rsmD	1754588..1755178 (-)	591	WP_286306858.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QUE61_RS08835 (PHIN5_17230)	-	1755179..1756519 (-)	1341	WP_286306859.1	pitrilysin family protein	-
QUE61_RS08840 (PHIN5_17240)	-	1756531..1757949 (-)	1419	WP_286306860.1	pitrilysin family protein	-
QUE61_RS08845 (PHIN5_17250)	pilA	1758008..1758913 (+)	906	WP_286306861.1	signal recognition particle-docking protein FtsY	Machinery gene
QUE61_RS08850 (PHIN5_17260)	rpoH	1759073..1759936 (+)	864	WP_286308347.1	RNA polymerase sigma factor RpoH	-
QUE61_RS08855 (PHIN5_17270)	-	1759940..1760512 (-)	573	WP_286306862.1	SCO family protein	-
QUE61_RS08860 (PHIN5_17280)	cyoE	1760516..1761400 (-)	885	WP_108509144.1	heme o synthase	-
QUE61_RS08865 (PHIN5_17290)	-	1761397..1762521 (-)	1125	WP_286306863.1	COX15/CtaA family protein	-
QUE61_RS08870 (PHIN5_17300)	-	1762518..1763171 (-)	654	WP_286306864.1	hypothetical protein	-
QUE61_RS08875 (PHIN5_17310)	-	1763185..1763901 (-)	717	WP_286306865.1	SURF1 family protein	-

Sequence

Protein

• Length: 301 a.a.
• Molecular weight: 32318.89 Da
• Isoelectric Point: 7.0272

>NTDB_id=103979 QUE61_RS08845 WP_286306861.1 1758008..1758913(+) (pilA) [Polynucleobacter sp. HIN5]
MFGLRKTLSSLFTRHRVDEAWFEHLEESLIKADVGVSTSTALMTSLRKSAKQHSITNSEDLKAVLVDELSHLLGDLEPTE
NPLNPSAAHAKPEVWLIVGVNGAGKTTSIGKLCHHFQAQGKSVLLAAGDTFRAAARNQLKEWGERNQVQVLSQESGDAGA
IAHDAIQAALSRQVDVVLIDTAGRLATQANLMEELKKVKRVISKLIPDAPHQIVLVLDGNTGQNGISQVLAFRNAIGLHG
LIITKLDGTAKGGVVCALGKELQNPSQTQGPKTYVYALGKGEQLGDLELFSAKAYAQELVE

Nucleotide

• Length: 906 bp

>NTDB_id=103979 QUE61_RS08845 WP_286306861.1 1758008..1758913(+) (pilA) [Polynucleobacter sp. HIN5]
ATGTTTGGTTTACGTAAAACACTTAGCTCACTCTTTACTCGTCACCGAGTGGATGAAGCCTGGTTTGAGCATTTAGAGGA
GTCACTCATTAAAGCCGATGTTGGAGTTTCGACATCGACCGCTCTAATGACTAGTCTACGCAAATCGGCCAAACAGCATT
CCATTACAAATTCTGAGGATTTAAAGGCAGTTCTGGTTGATGAGCTCAGCCATCTTTTAGGTGACCTAGAGCCCACTGAA
AACCCCTTAAACCCAAGCGCCGCGCATGCCAAGCCTGAAGTATGGCTGATTGTAGGGGTTAATGGTGCTGGCAAAACCAC
ATCGATCGGAAAACTATGTCATCACTTTCAGGCTCAAGGAAAATCAGTGCTCCTCGCTGCTGGGGATACATTCCGAGCAG
CAGCGCGTAATCAGCTCAAAGAGTGGGGTGAGCGCAATCAAGTACAAGTGCTAAGCCAAGAGAGCGGCGATGCAGGTGCG
ATTGCACATGATGCAATCCAGGCCGCCCTATCACGGCAGGTTGATGTTGTACTAATTGATACGGCTGGTCGACTCGCCAC
TCAAGCGAATCTGATGGAGGAGTTAAAAAAGGTAAAGCGGGTGATTTCTAAGCTGATCCCCGATGCTCCCCATCAAATTG
TGTTGGTCCTCGATGGCAATACGGGTCAAAATGGAATTTCCCAAGTTTTGGCCTTTCGAAACGCGATTGGCCTCCACGGC
CTTATCATCACCAAATTGGATGGCACCGCCAAAGGCGGGGTAGTTTGTGCGCTAGGTAAAGAGTTGCAAAACCCCTCCCA
AACACAGGGCCCAAAAACCTATGTCTATGCCCTTGGCAAAGGTGAGCAGTTGGGTGATTTGGAGTTATTTTCAGCCAAAG
CCTATGCTCAAGAGCTTGTAGAATAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (3-69)

• SRP54-type protein, GTPase domain (SRP54) (92-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.658	99.003	0.482