Detailed information NTG0103959

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUF32_RS14560
• Genome accession: NZ_AP028128
• Coordinates: 3087479..3088486 (-)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain IDH05335
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3082479..3093486

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUF32_RS14535 (KKIDH5335_27920)	rraA	3083120..3083647 (-)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-
QUF32_RS14540 (KKIDH5335_27930)	-	3083723..3084640 (-)	918	WP_020329401.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUF32_RS14545 (KKIDH5335_27940)	hslU	3084729..3086060 (-)	1332	WP_208563753.1	HslU--HslV peptidase ATPase subunit	-
QUF32_RS14550 (KKIDH5335_27950)	hslV	3086102..3086656 (-)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
QUF32_RS14555 (KKIDH5335_27960)	ftsN	3086792..3087349 (-)	558	WP_024373673.1	cell division protein FtsN	-
QUF32_RS14560 (KKIDH5335_27970)	cytR	3087479..3088486 (-)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
QUF32_RS14565 (KKIDH5335_27980)	priA	3088791..3090992 (-)	2202	WP_222733495.1	primosomal protein N'	-
QUF32_RS14570 (KKIDH5335_27990)	rpmE	3091238..3091456 (+)	219	WP_020329395.1	50S ribosomal protein L31	-
QUF32_RS14575 (KKIDH5335_28000)	-	3091668..3092945 (+)	1278	WP_024373675.1	malic enzyme-like NAD(P)-binding protein	-
QUF32_RS14580 (KKIDH5335_28010)	metJ	3093022..3093339 (-)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=103959 QUF32_RS14560 WP_020429332.1 3087479..3088486(-) (cytR) [Vibrio fluvialis strain IDH05335]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=103959 QUF32_RS14560 WP_020429332.1 3087479..3088486(-) (cytR) [Vibrio fluvialis strain IDH05335]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAGGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGATATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACATGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCTG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCGGAGCTTGAGCTACCTACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAGCGCGTGGCGCAAATCGCCGGACCGGAAGC
CGCGGTGCTGTGTCAGTTCCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTACCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGCCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTACGTGCCGGCTCACGTTTGCTGGAA
ACTCAGCTGGTGGTGCGTGAGAGTGCAGCGCCGCCTCGTTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901