Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABQ179_RS06415 Genome accession   NZ_CP167817
Coordinates   1514422..1514823 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas dyei strain WHRI 5755     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1509422..1519823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABQ179_RS06395 (ABQ179_006395) tsaB 1510524..1511243 (+) 720 WP_349810880.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  ABQ179_RS06400 (ABQ179_006400) - 1511240..1512157 (+) 918 WP_349810881.1 ADP-ribosylglycohydrolase family protein -
  ABQ179_RS06405 (ABQ179_006405) - 1512363..1513238 (-) 876 WP_104616122.1 energy transducer TonB -
  ABQ179_RS06410 (ABQ179_006410) gshB 1513235..1514185 (-) 951 WP_349810882.1 glutathione synthase -
  ABQ179_RS06415 (ABQ179_006415) pilG 1514422..1514823 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  ABQ179_RS06420 (ABQ179_006420) - 1514841..1515203 (+) 363 WP_006450735.1 PleD family two-component system response regulator -
  ABQ179_RS06425 (ABQ179_006425) - 1515203..1515733 (+) 531 WP_046962985.1 chemotaxis protein CheW -
  ABQ179_RS06430 (ABQ179_006430) - 1515773..1517809 (+) 2037 WP_349810883.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=1039550 ABQ179_RS06415 WP_005913706.1 1514422..1514823(+) (pilG) [Xanthomonas dyei strain WHRI 5755]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1039550 ABQ179_RS06415 WP_005913706.1 1514422..1514823(+) (pilG) [Xanthomonas dyei strain WHRI 5755]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCGACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGTGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment