Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACCO40_RS12500 | Genome accession | NZ_CP167793 |
| Coordinates | 2455223..2456260 (-) | Length | 345 a.a. |
| NCBI ID | WP_372401671.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii strain SHT-15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2450223..2461260
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCO40_RS12450 (ACCO40_12450) | tasA | 2450325..2451110 (-) | 786 | WP_014114390.1 | biofilm matrix protein TasA | - |
| ACCO40_RS12455 (ACCO40_12455) | sipW | 2451174..2451746 (-) | 573 | WP_372402795.1 | signal peptidase I SipW | - |
| ACCO40_RS12460 (ACCO40_12460) | tapA | 2451730..2452491 (-) | 762 | WP_072566543.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACCO40_RS12465 (ACCO40_12465) | - | 2452762..2453088 (+) | 327 | WP_014114393.1 | YqzG/YhdC family protein | - |
| ACCO40_RS12470 (ACCO40_12470) | - | 2453126..2453305 (-) | 180 | WP_372401661.1 | YqzE family protein | - |
| ACCO40_RS12475 (ACCO40_12475) | comGG | 2453377..2453751 (-) | 375 | WP_072183695.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACCO40_RS12480 (ACCO40_12480) | comGF | 2453752..2454135 (-) | 384 | WP_372401664.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACCO40_RS12485 (ACCO40_12485) | comGE | 2454161..2454508 (-) | 348 | WP_372401667.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACCO40_RS12490 (ACCO40_12490) | comGD | 2454492..2454923 (-) | 432 | WP_326198324.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACCO40_RS12495 (ACCO40_12495) | comGC | 2454913..2455209 (-) | 297 | WP_014114400.1 | comG operon protein ComGC | Machinery gene |
| ACCO40_RS12500 (ACCO40_12500) | comGB | 2455223..2456260 (-) | 1038 | WP_372401671.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACCO40_RS12505 (ACCO40_12505) | comGA | 2456247..2457317 (-) | 1071 | WP_072183690.1 | competence protein ComGA | Machinery gene |
| ACCO40_RS12510 (ACCO40_12510) | - | 2457531..2457942 (-) | 412 | Protein_2414 | CBS domain-containing protein | - |
| ACCO40_RS12515 (ACCO40_12515) | - | 2458005..2458952 (-) | 948 | WP_242734002.1 | magnesium transporter CorA family protein | - |
| ACCO40_RS12520 (ACCO40_12520) | - | 2459096..2460424 (+) | 1329 | WP_014114405.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39902.05 Da Isoelectric Point: 8.6758
>NTDB_id=1039427 ACCO40_RS12500 WP_372401671.1 2455223..2456260(-) (comGB) [Bacillus spizizenii strain SHT-15]
MKQIRKTWPLKDQAQLLKRLGEMTEGGYTLLDGIRLMELQMNKRQAADLTDAITHLREGAPFYQVLKGLSFHKEAVGICY
FAETHGELPDSMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETTRSTDMLFAFF
QHIDLVIILLALFTGGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLQSGLSIYDSLNAFKHQT
FLPFYRCEAEQVIERLKAGESIETAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFMLQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKTWPLKDQAQLLKRLGEMTEGGYTLLDGIRLMELQMNKRQAADLTDAITHLREGAPFYQVLKGLSFHKEAVGICY
FAETHGELPDSMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETTRSTDMLFAFF
QHIDLVIILLALFTGGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLQSGLSIYDSLNAFKHQT
FLPFYRCEAEQVIERLKAGESIETAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFMLQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1039427 ACCO40_RS12500 WP_372401671.1 2455223..2456260(-) (comGB) [Bacillus spizizenii strain SHT-15]
ATGAAACAGATTAGAAAAACCTGGCCGTTAAAGGATCAAGCCCAGTTATTGAAGCGGCTCGGTGAAATGACGGAGGGCGG
ATATACGCTTCTGGATGGAATACGGCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATGCGATCA
CTCATTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGGGTTTGTCATTTCATAAGGAAGCCGTAGGTATCTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGACTCCATGATTCAGAGCGGAGAGCTGCTGGAACGCAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCACACGTTCAACTGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTAATCATATTGTTGGCTCTATTTACAGGAGGTATCGGGCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTTATTTGTGTCAGAATTCCTTTAGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTACAATCAGGTCTCTCAATATATGACAGCCTTAACGCATTTAAACATCAAACG
TTTCTCCCTTTTTACCGCTGCGAGGCTGAACAAGTGATTGAACGGCTAAAAGCTGGTGAATCAATTGAAACCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGACAGCTGAGCGGCCGCCTTGATCGGGAGCTTT
TCACATACAGTCAGTTCATGTTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGAAAAACCTGGCCGTTAAAGGATCAAGCCCAGTTATTGAAGCGGCTCGGTGAAATGACGGAGGGCGG
ATATACGCTTCTGGATGGAATACGGCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATGCGATCA
CTCATTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGGGTTTGTCATTTCATAAGGAAGCCGTAGGTATCTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGACTCCATGATTCAGAGCGGAGAGCTGCTGGAACGCAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCACACGTTCAACTGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTAATCATATTGTTGGCTCTATTTACAGGAGGTATCGGGCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTTATTTGTGTCAGAATTCCTTTAGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTACAATCAGGTCTCTCAATATATGACAGCCTTAACGCATTTAAACATCAAACG
TTTCTCCCTTTTTACCGCTGCGAGGCTGAACAAGTGATTGAACGGCTAAAAGCTGGTGAATCAATTGAAACCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGACAGCTGAGCGGCCGCCTTGATCGGGAGCTTT
TCACATACAGTCAGTTCATGTTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
92.57 |
93.623 |
0.867 |