Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACCO40_RS07830 Genome accession   NZ_CP167793
Coordinates   1502101..1502565 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus spizizenii strain SHT-15     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497101..1507565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCO40_RS07810 (ACCO40_07810) kinA 1497568..1499388 (+) 1821 WP_114150605.1 sporulation histidine kinase KinA -
  ACCO40_RS07815 (ACCO40_07815) - 1499398..1500579 (-) 1182 WP_003218653.1 aminotransferase A -
  ACCO40_RS07820 (ACCO40_07820) - 1500781..1500942 (-) 162 WP_003218655.1 hypothetical protein -
  ACCO40_RS07825 (ACCO40_07825) cheV 1501148..1502059 (+) 912 WP_079288742.1 chemotaxis protein CheV -
  ACCO40_RS07830 (ACCO40_07830) kre 1502101..1502565 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ACCO40_RS07835 (ACCO40_07835) - 1502691..1503983 (-) 1293 WP_072566202.1 MFS transporter -
  ACCO40_RS07840 (ACCO40_07840) - 1504059..1504553 (-) 495 WP_072182876.1 L,D-transpeptidase family protein -
  ACCO40_RS07845 (ACCO40_07845) - 1504610..1505470 (-) 861 WP_114150604.1 metallophosphoesterase -
  ACCO40_RS07850 (ACCO40_07850) fadH 1505612..1506376 (+) 765 WP_114150603.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1039410 ACCO40_RS07830 WP_003232406.1 1502101..1502565(-) (kre) [Bacillus spizizenii strain SHT-15]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1039410 ACCO40_RS07830 WP_003232406.1 1502101..1502565(-) (kre) [Bacillus spizizenii strain SHT-15]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATACCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAACCCAAGGTTTAGCCAACAGCAATCGGACGTGCTTATTTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTGTTGCAAGAATATGTCGGCATGAAAGAAAAACCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTTTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment