Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACCO40_RS04615 Genome accession   NZ_CP167793
Coordinates   924796..925587 (+) Length   263 a.a.
NCBI ID   WP_014113104.1    Uniprot ID   G4NRG5
Organism   Bacillus spizizenii strain SHT-15     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 919796..930587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCO40_RS04585 (ACCO40_04585) - 920636..921667 (+) 1032 WP_372402575.1 FecCD family ABC transporter permease -
  ACCO40_RS04590 (ACCO40_04590) - 921780..922661 (+) 882 WP_114150784.1 PhzF family phenazine biosynthesis isomerase -
  ACCO40_RS04595 (ACCO40_04595) - 922748..923332 (+) 585 WP_014113101.1 nitroreductase -
  ACCO40_RS04600 (ACCO40_04600) - 923372..923563 (-) 192 WP_242734684.1 YfhD family protein -
  ACCO40_RS04605 (ACCO40_04605) - 923630..923740 (-) 111 WP_003223230.1 YfhE family protein -
  ACCO40_RS04610 (ACCO40_04610) - 923796..924707 (-) 912 WP_072182505.1 TIGR01777 family oxidoreductase -
  ACCO40_RS04615 (ACCO40_04615) recX 924796..925587 (+) 792 WP_014113104.1 recombination regulator RecX Regulator
  ACCO40_RS04620 (ACCO40_04620) - 925596..925910 (+) 315 WP_014113105.1 YfhH family protein -
  ACCO40_RS04625 (ACCO40_04625) - 926053..927246 (+) 1194 WP_014113106.1 MFS transporter -
  ACCO40_RS04630 (ACCO40_04630) - 927280..927432 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACCO40_RS04635 (ACCO40_04635) - 927557..927826 (+) 270 WP_014113107.1 YfhJ family protein -
  ACCO40_RS04640 (ACCO40_04640) - 927971..928489 (+) 519 WP_061188215.1 SH3 domain-containing protein -
  ACCO40_RS04645 (ACCO40_04645) - 928575..928907 (+) 333 WP_372402577.1 SdpI family protein -
  ACCO40_RS04650 (ACCO40_04650) - 928894..929754 (+) 861 WP_061188217.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30878.19 Da        Isoelectric Point: 6.8978

>NTDB_id=1039393 ACCO40_RS04615 WP_014113104.1 924796..925587(+) (recX) [Bacillus spizizenii strain SHT-15]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDYLKKKETPAPVIAEVIHKLNDYKYLNDQEFAVAYVSTHKKTNGKGPDVLFRELRAKGIGDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1039393 ACCO40_RS04615 WP_014113104.1 924796..925587(+) (recX) [Bacillus spizizenii strain SHT-15]
ATGCCATTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATCTTTCTCGATGAAAAATACGCCTT
CAGTGTAGACGCGGACGTACTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAACTTGATGACCTTGACATCATTGAGATTC
AATACGGTGATGAAGTGAAAAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGAATGAGGTCAACGAAAGAGGTA
GAGGACTATTTAAAGAAAAAAGAAACCCCGGCCCCTGTCATAGCGGAAGTCATCCATAAGCTGAACGACTATAAATACTT
AAACGACCAGGAATTTGCCGTAGCCTATGTCAGCACCCACAAAAAAACGAATGGAAAAGGTCCTGACGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATCGGCGACGATACAATTAAGGAGGCGCTGAGTTCCTTTTCCTTTGAAGATCAGACGAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAGGATAAAAAACTTTCAACAAAAGAACTCAAACAGCGCGCCCAAATGCA
GCTACAGCGCAAGGGCTTCTCATTTGATGTCATCAGCGCGGCGCTGGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

95.437

100

0.954

Multiple sequence alignment