Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACCO40_RS00575 | Genome accession | NZ_CP167793 |
| Coordinates | 103097..105529 (+) | Length | 810 a.a. |
| NCBI ID | WP_061188088.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii strain SHT-15 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98097..110529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCO40_RS00560 (ACCO40_00560) | ctsR | 100974..101438 (+) | 465 | WP_003225724.1 | transcriptional regulator CtsR | - |
| ACCO40_RS00565 (ACCO40_00565) | mcsA | 101452..102009 (+) | 558 | WP_014112328.1 | protein-arginine kinase activator protein McsA | - |
| ACCO40_RS00570 (ACCO40_00570) | - | 102009..103100 (+) | 1092 | WP_061188087.1 | protein arginine kinase | - |
| ACCO40_RS00575 (ACCO40_00575) | clpC | 103097..105529 (+) | 2433 | WP_061188088.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ACCO40_RS00580 (ACCO40_00580) | radA | 105621..106997 (+) | 1377 | WP_014112330.1 | DNA repair protein RadA | Machinery gene |
| ACCO40_RS00585 (ACCO40_00585) | disA | 107001..108083 (+) | 1083 | WP_014112331.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ACCO40_RS00590 (ACCO40_00590) | - | 108198..109298 (+) | 1101 | WP_014112332.1 | PIN/TRAM domain-containing protein | - |
| ACCO40_RS00595 (ACCO40_00595) | ispD | 109312..110010 (+) | 699 | WP_372402352.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ACCO40_RS00600 (ACCO40_00600) | ispF | 110003..110479 (+) | 477 | WP_072182890.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90091.58 Da Isoelectric Point: 6.1203
>NTDB_id=1039383 ACCO40_RS00575 WP_061188088.1 103097..105529(+) (clpC) [Bacillus spizizenii strain SHT-15]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQRHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQRHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=1039383 ACCO40_RS00575 WP_061188088.1 103097..105529(+) (clpC) [Bacillus spizizenii strain SHT-15]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTCCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGTGAAGGGATTGCTGCTAAAGCTCTACAAGCGCTTG
GGCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGGCATTCTTATGTCGGGACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGAGTGCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTACAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTTGATCCTGTAATCGGCAGAAGCAA
GGAAATTCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTGCGCGATAAACGCGTAATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTTCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCGA
TTGACGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGTGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATACAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGAGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCAGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAGAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTCATTGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTTAGACGTGCAAGAGCAGGATTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTTGCGAGAGCACTTGCTGAA
TCCATTTTCGGTGATGAGGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTCCTGCAAGTTCTTGAAGACGGACGATTGACT
GATTCTAAGGGACGTACAGTCGATTTCCGTAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGTGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTCACT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACTTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAGACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTCCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGTGAAGGGATTGCTGCTAAAGCTCTACAAGCGCTTG
GGCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGGCATTCTTATGTCGGGACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGAGTGCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTACAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTTGATCCTGTAATCGGCAGAAGCAA
GGAAATTCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTGCGCGATAAACGCGTAATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTTCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCGA
TTGACGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGTGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATACAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGAGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCAGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAGAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTCATTGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTTAGACGTGCAAGAGCAGGATTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTTGCGAGAGCACTTGCTGAA
TCCATTTTCGGTGATGAGGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTCCTGCAAGTTCTTGAAGACGGACGATTGACT
GATTCTAAGGGACGTACAGTCGATTTCCGTAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGTGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTCACT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACTTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAGACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.136 |
100 |
0.991 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.249 |
99.012 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.117 |
99.877 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.523 |
87.778 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae D39 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae R6 |
53.612 |
76.914 |
0.412 |