Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   ACDJ02_RS03525 Genome accession   NZ_CP167777
Coordinates   717964..722589 (+) Length   1541 a.a.
NCBI ID   WP_151829415.1    Uniprot ID   -
Organism   Acinetobacter ursingii strain E5131942     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 712964..727589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDJ02_RS03500 (ACDJ02_03500) - 713412..714059 (-) 648 WP_372376006.1 hypothetical protein -
  ACDJ02_RS03505 (ACDJ02_03505) pilG 714365..714748 (+) 384 WP_004992473.1 twitching motility response regulator PilG Regulator
  ACDJ02_RS03510 (ACDJ02_03510) - 714776..715144 (+) 369 WP_004992474.1 response regulator -
  ACDJ02_RS03515 (ACDJ02_03515) - 715150..715686 (+) 537 WP_004992475.1 chemotaxis protein CheW -
  ACDJ02_RS03520 (ACDJ02_03520) - 715734..717815 (+) 2082 WP_004992476.1 methyl-accepting chemotaxis protein -
  ACDJ02_RS03525 (ACDJ02_03525) chpA 717964..722589 (+) 4626 WP_151829415.1 Hpt domain-containing protein Regulator
  ACDJ02_RS03530 (ACDJ02_03530) - 722589..723041 (+) 453 WP_004992479.1 hypothetical protein -
  ACDJ02_RS03535 (ACDJ02_03535) - 723176..723340 (-) 165 WP_171492754.1 hypothetical protein -
  ACDJ02_RS03540 (ACDJ02_03540) - 723360..724565 (-) 1206 WP_151724289.1 RtcB family protein -
  ACDJ02_RS03545 (ACDJ02_03545) - 724870..726330 (-) 1461 WP_044434726.1 amino acid permease -
  ACDJ02_RS03550 (ACDJ02_03550) - 726344..727363 (-) 1020 WP_151724299.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 1541 a.a.        Molecular weight: 173010.30 Da        Isoelectric Point: 4.3850

>NTDB_id=1039311 ACDJ02_RS03525 WP_151829415.1 717964..722589(+) (chpA) [Acinetobacter ursingii strain E5131942]
MKEILKHLVEKISLPEDSFLDQDEEILEIFIEELEEIFQELDQLIPQWVADPDEQQVLADVRRHFHTLKGSGRMVGAKSS
SELAWTVEEALNRIIAKTLPLSADLQRFVQVVFNVYRFKFYHDFKNTQPHSIDIRPLVLLGQQLQHQQDVEPALEELLDL
AEQLNTESGITGLEIQQQQIIEAEQPVEVAPVAIADTYVDAVASSDDSLIEETMAIFLEEAEEHLQTIDTFLQQDEPSDQ
SYNQLIRALHTLRGSSSMAHIQQVFEASSKVETLFKTLMQDELESTSNETALLTHYAEFVRDYLHTLHQKGSQQQLDKID
QKFNQAWENYGFNIEEIAHEAQHPQGVVTSLLQLDIENLLNADYEFEKRVKLEFPVYIQALITEASSLIEHTHNRAAQGV
HDYVLQLKPAYEQLLEKPELLHLDYAFDIFGQAHQQVIHLFDTLAAGQRVSLGQEQLNVIHELQDFVQQDIETAITDKKV
SSELSADKVSAEPETVSIEPVAVSEPNVSTFDLSSISARIQQDHQHLDSEQANRNFDADLLDIFLEEADELLVGIDADLN
TWSQQQSNTSALNNLMRYLHTLKGGANMVQATHMGLIAHELETIYQRLIHGQIHSSENMIQIIRLVQDDIADRIQTLRDE
AVDYPATEVIELLGNIEQVLQGVPQQQPESATRTTSVDSTLAQVVAEPPTEVVEHELTADHLESVALGEPTSGVESDAVV
AEEQLQDSTSAANDALESQASISNTNVDIDNTKPYQDTDPDDVQSLVEATFYEEAAELLDAGQQLLNRWFDERTNRSILL
QLQRTVHSLKGGARMAELEPVAVIASHLENAFEQFAVKAFSSNAYDHLLLTAFTWLKAAIFERSYNNYDGLKHTLERLEF
VDTNAQIPTKLARADLFSQEQVMEFVQGDGTEPPSMLGEWDNTVQADDSNEMIRVSADLIEKMINLSGENAINRSRIEMD
LGQLGNTLVEMELAIQRLADQLRRMEGELESQIIAKHGAENLRYIDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLS
DKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTASSLNRPAELVVNNTEGELDRNILERLVTPLEHM
LRNAVDHGVEDREERLKLGKPEIGRIELNISRQGTDVLVSFSDDGKGIDVNKIKAKALENGLMTEDQKLEAQEILQYIFH
PGFSTATSVTQISGRGVGLDVVQSSIKALGGHVSVDSTFGSGTTFTIRVPTTVAVSDALMVKVGDQQFALPLAQIDRIVR
IAPATLERYFHGQDDYFNIDNTPYRLRYLAEFVSNQPIPKLSGIAHSLPVLLVKGAHGQTIALLVDQLVGSRAQIVVKPI
GRQFASIGAVAGATILGDGHVCLILDGQNIARQIQSTQRNKQVVEGREKTRHTDERRLIMIVDDSVTVRKVTSRLLERQG
FDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHELHQDMPIIMITSRTGEKHRERALSLGVTHYMGKP
FQESELLENIEALLETASGSY

Nucleotide


Download         Length: 4626 bp        

>NTDB_id=1039311 ACDJ02_RS03525 WP_151829415.1 717964..722589(+) (chpA) [Acinetobacter ursingii strain E5131942]
ATGAAAGAAATATTAAAACATCTTGTTGAAAAAATAAGCTTACCTGAAGACAGTTTTCTTGATCAGGATGAAGAAATTCT
TGAAATTTTTATTGAAGAATTAGAAGAAATTTTTCAAGAATTGGATCAACTTATTCCGCAGTGGGTGGCTGATCCCGATG
AGCAGCAGGTTTTAGCGGACGTTCGTCGCCATTTTCATACTCTAAAAGGGTCTGGTCGAATGGTGGGGGCGAAATCTTCC
AGTGAACTGGCGTGGACAGTTGAAGAAGCACTCAATCGAATTATTGCCAAAACCTTGCCATTAAGTGCAGATTTACAGCG
TTTTGTGCAAGTGGTATTTAATGTTTATCGTTTTAAATTTTATCATGATTTTAAAAATACACAGCCACACTCTATCGATA
TTCGCCCATTGGTTTTGTTGGGACAGCAGTTACAACACCAACAAGACGTCGAGCCTGCTTTAGAAGAATTACTCGATTTA
GCTGAACAGTTAAATACAGAATCTGGAATTACAGGGCTCGAAATTCAGCAACAACAGATTATTGAAGCTGAACAGCCAGT
TGAAGTAGCGCCTGTTGCCATAGCTGACACCTATGTGGACGCAGTTGCTTCATCAGATGATAGTCTGATTGAAGAAACCA
TGGCGATTTTCCTTGAAGAAGCAGAAGAACATCTACAAACAATTGATACTTTTTTACAGCAAGATGAGCCATCAGATCAA
AGTTATAATCAATTGATTCGCGCTTTGCATACTTTGCGCGGTAGTTCATCGATGGCGCATATTCAGCAAGTATTTGAAGC
CAGCAGCAAGGTAGAAACGCTGTTTAAAACCTTGATGCAAGATGAGCTTGAGTCGACTTCAAATGAAACAGCGCTCTTAA
CCCACTACGCTGAATTTGTTCGAGATTATCTACATACACTGCACCAAAAGGGCTCTCAACAACAGCTTGACAAAATTGAT
CAAAAATTTAATCAAGCATGGGAAAACTATGGCTTTAATATCGAAGAAATCGCACATGAAGCACAGCATCCACAAGGTGT
TGTCACTTCACTATTGCAATTAGATATTGAAAATCTACTGAATGCAGACTATGAGTTTGAAAAACGCGTCAAACTGGAAT
TCCCTGTCTATATTCAAGCATTGATTACCGAGGCAAGTTCTTTAATTGAGCATACGCATAATCGAGCAGCTCAAGGCGTT
CATGATTATGTCTTGCAATTAAAGCCTGCTTATGAACAATTACTTGAAAAACCTGAATTACTGCATCTGGATTATGCCTT
TGATATTTTTGGACAGGCACACCAGCAAGTCATTCATTTATTTGATACCTTGGCAGCAGGGCAGCGAGTAAGCTTGGGAC
AAGAGCAACTCAATGTGATTCATGAGTTGCAAGACTTTGTTCAACAAGATATTGAAACAGCGATTACGGATAAGAAAGTA
TCATCTGAGCTAAGTGCTGATAAAGTAAGTGCTGAACCTGAGACTGTTTCCATTGAGCCTGTTGCGGTATCAGAGCCAAA
TGTTTCAACATTTGATTTATCGTCAATTTCTGCACGTATTCAACAAGATCATCAGCACCTAGATTCAGAGCAAGCCAATC
GTAATTTCGATGCAGACCTTCTCGATATCTTTTTAGAAGAAGCTGATGAGCTGTTGGTCGGTATTGACGCAGACTTAAAC
ACTTGGTCGCAGCAACAAAGTAATACGTCTGCCTTGAATAATTTGATGCGCTATTTACACACCTTAAAAGGTGGCGCAAA
TATGGTTCAGGCAACCCATATGGGACTGATTGCGCATGAGTTAGAAACCATTTATCAACGCTTGATTCATGGGCAAATAC
ATTCTTCTGAAAATATGATACAGATTATTCGTCTGGTACAAGATGATATTGCTGATCGGATTCAAACGTTGCGTGATGAA
GCAGTAGATTATCCAGCGACAGAAGTGATTGAGTTGCTTGGAAATATTGAGCAGGTTCTACAAGGGGTACCACAGCAACA
GCCTGAGAGTGCAACGCGGACTACTTCTGTTGATAGTACCTTGGCGCAAGTTGTTGCTGAGCCACCAACTGAAGTTGTTG
AGCATGAATTAACGGCAGATCATCTTGAATCAGTTGCTCTTGGTGAACCAACATCAGGCGTGGAGTCTGATGCAGTTGTT
GCTGAGGAACAATTACAGGATTCGACTTCCGCTGCGAATGATGCGCTAGAAAGTCAAGCATCGATTTCAAATACCAATGT
TGATATCGATAATACCAAACCGTATCAAGATACAGATCCTGATGATGTTCAATCTTTGGTGGAAGCGACTTTCTATGAAG
AAGCGGCAGAGTTGCTTGATGCTGGACAGCAACTTCTCAATCGCTGGTTTGATGAACGGACTAACCGAAGTATTTTGCTT
CAATTGCAACGTACAGTGCATAGCTTAAAAGGTGGTGCACGAATGGCAGAATTAGAGCCTGTTGCAGTAATTGCCTCACA
TCTTGAAAATGCCTTTGAGCAATTTGCAGTAAAAGCCTTTAGTTCCAATGCTTATGACCATCTCTTGCTGACGGCATTTA
CATGGTTAAAGGCAGCTATTTTTGAACGTTCATATAATAACTATGATGGTTTAAAGCATACCTTAGAACGTCTTGAATTT
GTCGATACCAATGCGCAAATTCCAACTAAACTGGCTCGCGCGGATCTATTCTCGCAAGAACAAGTGATGGAGTTTGTACA
GGGAGATGGTACAGAACCGCCATCTATGCTGGGTGAATGGGACAACACCGTACAGGCTGATGATTCAAATGAGATGATCC
GTGTTTCTGCGGATCTGATCGAAAAAATGATTAACTTGTCTGGTGAAAATGCCATTAACCGTTCGCGTATCGAAATGGAT
TTGGGACAGTTAGGCAATACACTGGTCGAAATGGAATTGGCGATTCAACGTTTGGCAGATCAGTTACGCCGAATGGAAGG
CGAATTAGAAAGTCAGATTATCGCCAAGCATGGGGCAGAAAACTTACGTTATATCGACTTTGACCCATTAGAAATGGATC
AATATTCATCATTGAATCAACTGTCAAAATCACTTGCTGAATCTGCATCGGATTTGGTTGACTTCAAAACCACATTATCC
GACAAAATTCGTGATACAGAAGGTTTGTTATTACAACAATCACGTATTCAGGCTGAAATTCAGGAAAGTCTGATGCGTAC
CCGATTAGTTCCGTTCTCACGACTTTTACCTCGCTTACAGCGTATTGTGCGTCAGACTGCAAGTAGTTTGAACCGTCCAG
CTGAATTGGTGGTCAATAATACCGAAGGCGAACTGGATCGAAATATCTTGGAACGCTTGGTCACGCCACTTGAACACATG
CTGCGAAATGCAGTCGATCATGGGGTAGAAGATCGTGAAGAGCGTTTAAAACTGGGTAAACCTGAAATAGGGCGTATTGA
GCTAAATATTAGCCGCCAAGGAACAGATGTTCTGGTGAGCTTTAGCGATGATGGTAAAGGTATTGATGTTAATAAAATCA
AAGCCAAAGCTTTAGAAAATGGTTTGATGACTGAGGATCAAAAACTCGAAGCACAGGAAATTTTGCAATACATTTTCCAT
CCTGGGTTTAGTACAGCGACCTCAGTGACCCAAATTTCAGGACGTGGTGTTGGTCTGGATGTGGTGCAAAGTAGTATTAA
GGCGCTTGGTGGTCATGTTAGTGTCGATTCAACATTCGGCTCTGGTACCACTTTTACTATTCGTGTACCAACGACTGTGG
CAGTGAGTGATGCACTCATGGTGAAAGTCGGTGATCAGCAATTTGCCTTGCCTTTGGCTCAGATTGACCGAATTGTGCGT
ATTGCGCCTGCAACTCTTGAACGCTATTTCCATGGTCAGGATGATTATTTTAATATCGATAATACTCCATATCGTTTACG
TTATCTGGCGGAGTTTGTCAGCAATCAGCCTATTCCAAAATTATCTGGTATTGCACATTCATTACCTGTGTTATTGGTTA
AAGGCGCGCATGGTCAGACCATTGCGTTATTGGTCGATCAATTGGTCGGTTCGCGTGCACAAATTGTAGTGAAACCAATC
GGACGACAGTTCGCAAGTATTGGCGCTGTTGCTGGGGCGACAATTTTAGGTGATGGTCATGTTTGTCTCATTCTGGATGG
ACAAAACATTGCACGTCAGATCCAATCGACACAACGTAATAAACAAGTTGTTGAAGGCAGAGAAAAAACACGTCATACCG
ATGAACGTCGTCTGATCATGATCGTAGATGACTCGGTGACTGTCCGTAAAGTTACTTCGCGGCTACTGGAACGTCAGGGC
TTTGATGTGGTGACGGCCAAAGATGGTGTCGACGCCATGGAACAGCTTGAAAATGTCAAACCTGATTTGATGTTGCTGGA
TATTGAAATGCCTCGCATGGATGGTTTTGAGGTGACTAATCTGGTACGCCATCATGAGTTACATCAGGATATGCCAATTA
TCATGATCACATCACGTACTGGTGAAAAACATCGTGAACGTGCATTGTCACTTGGCGTAACGCATTACATGGGTAAACCG
TTCCAAGAATCAGAATTGCTTGAGAATATTGAAGCATTACTTGAAACAGCTTCAGGGAGTTACTGA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1258-1393)

Hpt domain (Hpt)

(539-625)

Hpt domain (Hpt)

(213-289)

Hpt domain (Hpt)

(25-105)

Hpt domain (Hpt)

(770-833)

Response regulator receiver domain (Response_reg)

(1419-1530)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1115-1251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.14

100

0.613

Multiple sequence alignment