Detailed information NTG1038862

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KJP77_RS04000
• Genome accession: NZ_OX419554
• Coordinates: 759571..760698 (-)
• Length: 375 a.a.
• NCBI ID: WP_088467555.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6160
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 754571..765698

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP77_RS03980 (NRS6160_03960)	-	755648..756088 (-)	441	WP_250541140.1	very short patch repair endonuclease	-
KJP77_RS03985 (NRS6160_03965)	-	756158..757888 (-)	1731	WP_172480934.1	hypothetical protein	-
KJP77_RS03990 (NRS6160_03970)	-	758081..759292 (+)	1212	WP_172480933.1	restriction endonuclease	-
KJP77_RS03995 (NRS6160_03975)	-	759384..759581 (-)	198	WP_088467554.1	hypothetical protein	-
KJP77_RS04000 (NRS6160_03980)	rapC	759571..760698 (-)	1128	WP_088467555.1	Rap family tetratricopeptide repeat protein	Regulator
KJP77_RS04005	-	760889..761192 (-)	304	Protein_736	hypothetical protein	-
KJP77_RS04010 (NRS6160_03985)	-	761277..761672 (-)	396	WP_048655144.1	immunity 22 family protein	-
KJP77_RS04015 (NRS6160_03990)	-	761685..763571 (-)	1887	WP_172480932.1	T7SS effector LXG polymorphic toxin	-
KJP77_RS04020 (NRS6160_03995)	-	763738..764076 (+)	339	WP_021481280.1	hypothetical protein	-
KJP77_RS04025 (NRS6160_04000)	-	764089..765009 (+)	921	WP_046380836.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44348.03 Da
• Isoelectric Point: 6.6866

>NTDB_id=1038862 KJP77_RS04000 WP_088467555.1 759571..760698(-) (rapC) [Bacillus subtilis isolate NRS6160]
MGTISSPHVGIKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKIGELTKAAK
YMEQSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFDDNLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQILRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=1038862 KJP77_RS04000 WP_088467555.1 759571..760698(-) (rapC) [Bacillus subtilis isolate NRS6160]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATAAAAATTAATGAATGGAACCGGCATATTCAAAAGTTTAATGTGACAGA
TGCTGAAATGCTTAAAGCTGAGATCGAACGGGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAATACAATTCCTTATATTTCGGATGAAATCG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACACACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATTGCAGGAAACTA
CGACGATTTAGAAAGTCATGAAAAGGCGCTCCCTCACCTTGAACAGGCACTAAAAGGCGCACGGCTTCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATTGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGCAATCGATTCTCCAATTCAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGACGATA
ATCTATTTAAAATTATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCTGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (221-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.425	100	0.419
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392