Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ACBW56_RS18280 Genome accession   NZ_CP167196
Coordinates   3687823..3690123 (+) Length   766 a.a.
NCBI ID   WP_330728972.1    Uniprot ID   -
Organism   Bacillus velezensis strain FRI-TD24     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3682823..3695123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACBW56_RS18250 (ACBW56_18250) - 3682829..3684295 (+) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  ACBW56_RS18255 (ACBW56_18255) - 3684425..3685645 (+) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  ACBW56_RS18260 (ACBW56_18260) - 3685652..3685993 (-) 342 WP_014305721.1 hypothetical protein -
  ACBW56_RS18265 (ACBW56_18265) degQ 3686459..3686599 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACBW56_RS18270 (ACBW56_18270) - 3686807..3687667 (+) 861 WP_159073777.1 polyprenyl synthetase family protein -
  ACBW56_RS18275 (ACBW56_18275) comX 3687636..3687809 (+) 174 WP_012118314.1 competence pheromone ComX -
  ACBW56_RS18280 (ACBW56_18280) comP 3687823..3690123 (+) 2301 WP_330728972.1 histidine kinase Regulator
  ACBW56_RS18285 (ACBW56_18285) comA 3690204..3690848 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  ACBW56_RS18290 (ACBW56_18290) - 3690870..3691253 (+) 384 WP_003152054.1 hotdog fold thioesterase -
  ACBW56_RS18295 (ACBW56_18295) mnhG 3691293..3691667 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ACBW56_RS18300 (ACBW56_18300) - 3691651..3691935 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  ACBW56_RS18305 (ACBW56_18305) - 3691935..3692411 (-) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  ACBW56_RS18310 (ACBW56_18310) - 3692417..3693898 (-) 1482 WP_014305717.1 Na+/H+ antiporter subunit D -
  ACBW56_RS18315 (ACBW56_18315) - 3693891..3694232 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ACBW56_RS18320 (ACBW56_18320) - 3694232..3694663 (-) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88274.52 Da        Isoelectric Point: 7.1698

>NTDB_id=1038802 ACBW56_RS18280 WP_330728972.1 3687823..3690123(+) (comP) [Bacillus velezensis strain FRI-TD24]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITIGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMISKVCVLEVEGDLNIRCFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGSKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERASFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=1038802 ACBW56_RS18280 WP_330728972.1 3687823..3690123(+) (comP) [Bacillus velezensis strain FRI-TD24]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTGATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTGTTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATAAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTTAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACAGGTATAGCATAT
GTGAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTTTATTTTTCATTACCATAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCATTAAAACAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGATTAGTAAAGTATGTGTTTTAGAAGTAGAAGGAGACTTAAATATAAGGTGTTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAAATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCAGTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACCTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCACCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAAGAGCGTGCGTCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.266

100

0.563


Multiple sequence alignment