Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KJP78_RS16695 Genome accession   NZ_OX419553
Coordinates   3155409..3156104 (-) Length   231 a.a.
NCBI ID   WP_088326791.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6183     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3150409..3161104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP78_RS16675 (NRS6183_16540) yttA 3150836..3151582 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  KJP78_RS16680 (NRS6183_16545) bceB 3151619..3153559 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  KJP78_RS16685 (NRS6183_16550) bceA 3153549..3154310 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  KJP78_RS16690 (NRS6183_16555) bceS 3154412..3155416 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  KJP78_RS16695 (NRS6183_16560) braR 3155409..3156104 (-) 696 WP_088326791.1 two-component response regulator BceR Regulator
  KJP78_RS16700 (NRS6183_16565) ytrF 3156201..3157511 (-) 1311 WP_198878556.1 ABC transporter permease YtrF -
  KJP78_RS16705 (NRS6183_16570) ytrE 3157501..3158196 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  KJP78_RS16710 (NRS6183_16575) ytrD 3158211..3159188 (-) 978 WP_029726913.1 ABC transporter permease YtrD -
  KJP78_RS16715 (NRS6183_16580) ytrC 3159218..3160204 (-) 987 WP_029726914.1 ABC transporter permease YtrC -
  KJP78_RS16720 (NRS6183_16585) ytrB 3160198..3161076 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26881.72 Da        Isoelectric Point: 5.3731

>NTDB_id=1038802 KJP78_RS16695 WP_088326791.1 3155409..3156104(-) (braR) [Bacillus subtilis isolate NRS6183]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=1038802 KJP78_RS16695 WP_088326791.1 3155409..3156104(-) (braR) [Bacillus subtilis isolate NRS6183]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment