Detailed information
Bioinformatically predicted
Overview
| Name | rapF | Type | Regulator |
| Locus tag | ACBW56_RS15475 | Genome accession | NZ_CP167196 |
| Coordinates | 3142884..3144029 (-) | Length | 381 a.a. |
| NCBI ID | WP_003151067.1 | Uniprot ID | A0A6A8LBV3 |
| Organism | Bacillus velezensis strain FRI-TD24 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3137884..3149029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACBW56_RS15435 (ACBW56_15435) | speE | 3138177..3139007 (+) | 831 | WP_003151052.1 | spermidine synthase | - |
| ACBW56_RS15440 (ACBW56_15440) | speB | 3139067..3139939 (+) | 873 | WP_003151054.1 | agmatinase | - |
| ACBW56_RS15445 (ACBW56_15445) | - | 3140109..3140327 (+) | 219 | WP_003151056.1 | LuxR C-terminal-related transcriptional regulator | - |
| ACBW56_RS15450 (ACBW56_15450) | - | 3140918..3141430 (-) | 513 | WP_015387558.1 | stage II sporulation protein M | - |
| ACBW56_RS15455 (ACBW56_15455) | - | 3141474..3141755 (-) | 282 | WP_014306021.1 | hypothetical protein | - |
| ACBW56_RS15460 (ACBW56_15460) | - | 3142163..3142366 (-) | 204 | WP_003151062.1 | hypothetical protein | - |
| ACBW56_RS15465 (ACBW56_15465) | - | 3142380..3142583 (-) | 204 | WP_003151064.1 | helix-turn-helix transcriptional regulator | - |
| ACBW56_RS15470 (ACBW56_15470) | - | 3142781..3142900 (-) | 120 | WP_003151066.1 | PhrC/PhrF family phosphatase-inhibitory pheromone | - |
| ACBW56_RS15475 (ACBW56_15475) | rapF | 3142884..3144029 (-) | 1146 | WP_003151067.1 | tetratricopeptide repeat protein | Regulator |
| ACBW56_RS15480 (ACBW56_15480) | - | 3144321..3144749 (+) | 429 | WP_003151069.1 | DUF1934 domain-containing protein | - |
| ACBW56_RS15485 (ACBW56_15485) | argS | 3144746..3146416 (+) | 1671 | WP_003151071.1 | arginine--tRNA ligase | - |
| ACBW56_RS15490 (ACBW56_15490) | narK | 3146550..3147740 (+) | 1191 | WP_003151073.1 | nitrate transporter NarK | - |
| ACBW56_RS15495 (ACBW56_15495) | - | 3147838..3148554 (+) | 717 | WP_014306017.1 | Crp/Fnr family transcriptional regulator | - |
Sequence
Protein
Download Length: 381 a.a. Molecular weight: 45339.49 Da Isoelectric Point: 4.9293
>NTDB_id=1038791 ACBW56_RS15475 WP_003151067.1 3142884..3144029(-) (rapF) [Bacillus velezensis strain FRI-TD24]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELDQREYLSAIKFFKKAETKLSFIKDTIDKAEYFFKMSEVYYYLKQTYVS
TDYARQAYEIYKAQSSYDIRLIQCQSLFGANFLDLKLYDRAITHFQKAFSLAETEKQPQLMGRTLYNIALCKQSLNDYEA
AITYVEKAIDVFESAKMTPSLPQAYFLMTQIHYKLERYDKALEYHKKGVIYSEESADSVYLHEFEFLKSLYVNGPDEDAM
KRSFDFLESKMMYADIEDFALDAAKYYHKLEDYKKASTYFLKVEEARQHIQGGVTFYEAEV
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELDQREYLSAIKFFKKAETKLSFIKDTIDKAEYFFKMSEVYYYLKQTYVS
TDYARQAYEIYKAQSSYDIRLIQCQSLFGANFLDLKLYDRAITHFQKAFSLAETEKQPQLMGRTLYNIALCKQSLNDYEA
AITYVEKAIDVFESAKMTPSLPQAYFLMTQIHYKLERYDKALEYHKKGVIYSEESADSVYLHEFEFLKSLYVNGPDEDAM
KRSFDFLESKMMYADIEDFALDAAKYYHKLEDYKKASTYFLKVEEARQHIQGGVTFYEAEV
Nucleotide
Download Length: 1146 bp
>NTDB_id=1038791 ACBW56_RS15475 WP_003151067.1 3142884..3144029(-) (rapF) [Bacillus velezensis strain FRI-TD24]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGATCAGCGGGAATATTTGTCGGCTATAAAATTTTTTAAAAAGGCTGAGACGAAACTCTCATTTA
TTAAGGATACTATTGATAAAGCCGAGTACTTTTTCAAGATGTCTGAAGTCTACTACTATTTGAAACAAACGTATGTATCT
ACCGATTACGCAAGGCAGGCATATGAAATATATAAAGCTCAGTCGTCATACGATATCAGGCTCATACAATGCCAATCCTT
ATTCGGAGCAAATTTCCTGGATTTAAAACTATATGATCGGGCAATTACTCACTTTCAAAAGGCTTTTTCTTTGGCAGAAA
CAGAAAAACAGCCTCAATTAATGGGCAGGACGCTGTATAACATCGCACTTTGCAAACAAAGCCTGAACGACTATGAAGCA
GCTATAACTTATGTTGAAAAAGCCATTGATGTTTTTGAAAGTGCTAAAATGACCCCTTCTTTGCCCCAAGCATATTTTTT
AATGACACAGATTCATTATAAATTAGAAAGATACGACAAAGCGCTCGAGTATCATAAAAAAGGAGTTATCTATTCCGAAG
AGTCAGCAGATTCAGTTTATTTACACGAATTCGAATTTTTAAAATCTTTGTATGTGAACGGACCTGATGAGGATGCAATG
AAACGGAGTTTTGACTTTTTGGAAAGTAAGATGATGTATGCAGATATAGAAGATTTTGCTCTTGATGCAGCTAAATATTA
TCACAAACTTGAAGATTATAAAAAAGCTTCAACATACTTTTTAAAAGTTGAAGAAGCAAGACAGCATATTCAAGGGGGGG
TAACTTTTTATGAAGCTGAAGTATAA
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGATCAGCGGGAATATTTGTCGGCTATAAAATTTTTTAAAAAGGCTGAGACGAAACTCTCATTTA
TTAAGGATACTATTGATAAAGCCGAGTACTTTTTCAAGATGTCTGAAGTCTACTACTATTTGAAACAAACGTATGTATCT
ACCGATTACGCAAGGCAGGCATATGAAATATATAAAGCTCAGTCGTCATACGATATCAGGCTCATACAATGCCAATCCTT
ATTCGGAGCAAATTTCCTGGATTTAAAACTATATGATCGGGCAATTACTCACTTTCAAAAGGCTTTTTCTTTGGCAGAAA
CAGAAAAACAGCCTCAATTAATGGGCAGGACGCTGTATAACATCGCACTTTGCAAACAAAGCCTGAACGACTATGAAGCA
GCTATAACTTATGTTGAAAAAGCCATTGATGTTTTTGAAAGTGCTAAAATGACCCCTTCTTTGCCCCAAGCATATTTTTT
AATGACACAGATTCATTATAAATTAGAAAGATACGACAAAGCGCTCGAGTATCATAAAAAAGGAGTTATCTATTCCGAAG
AGTCAGCAGATTCAGTTTATTTACACGAATTCGAATTTTTAAAATCTTTGTATGTGAACGGACCTGATGAGGATGCAATG
AAACGGAGTTTTGACTTTTTGGAAAGTAAGATGATGTATGCAGATATAGAAGATTTTGCTCTTGATGCAGCTAAATATTA
TCACAAACTTGAAGATTATAAAAAAGCTTCAACATACTTTTTAAAAGTTGAAGAAGCAAGACAGCATATTCAAGGGGGGG
TAACTTTTTATGAAGCTGAAGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
74.803 |
100 |
0.748 |
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
53.158 |
99.738 |
0.53 |