Detailed information NTG1038787

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACBW56_RS13710
• Genome accession: NZ_CP167196
• Coordinates: 2797724..2798836 (-)
• Length: 370 a.a.
• NCBI ID: WP_014304178.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FRI-TD24
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2792724..2803836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACBW56_RS13695 (ACBW56_13695)	gyrA	2792810..2795269 (-)	2460	WP_004392898.1	DNA gyrase subunit A	-
ACBW56_RS13700 (ACBW56_13700)	gyrB	2795485..2797401 (-)	1917	WP_004392900.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
ACBW56_RS13705 (ACBW56_13705)	remB	2797461..2797706 (-)	246	WP_004392908.1	extracellular matrix regulator RemB	-
ACBW56_RS13710 (ACBW56_13710)	recF	2797724..2798836 (-)	1113	WP_014304178.1	DNA replication/repair protein RecF	Machinery gene
ACBW56_RS13715 (ACBW56_13715)	rlbA	2798852..2799067 (-)	216	WP_303303038.1	ribosome maturation protein RlbA	-
ACBW56_RS13720 (ACBW56_13720)	dnaN	2799202..2800338 (-)	1137	WP_004392911.1	DNA polymerase III subunit beta	-
ACBW56_RS13725 (ACBW56_13725)	dnaA	2800523..2801863 (-)	1341	WP_004392913.1	chromosomal replication initiator protein DnaA	-
ACBW56_RS13730 (ACBW56_13730)	rpmH	2802485..2802619 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
ACBW56_RS13735 (ACBW56_13735)	rnpA	2802774..2803124 (+)	351	WP_004392944.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42428.35 Da
• Isoelectric Point: 7.0882

>NTDB_id=1038787 ACBW56_RS13710 WP_014304178.1 2797724..2798836(-) (recF) [Bacillus velezensis strain FRI-TD24]
MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDEDYAKIEGRVMKRNGD
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQR
NHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVARRLQFTAQLEKWAQPIHSGISRGIEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHDTLHQAGMFRVENGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=1038787 ACBW56_RS13710 WP_014304178.1 2797724..2798836(-) (recF) [Bacillus velezensis strain FRI-TD24]
TTGTATATCCAAAATTTAGAATTAACATCCTACCGTAATTATGAGCGCGCTGAGCTTCAATTCGAAAACAAGGTGAATGT
GATCATCGGGGAAAATGCCCAGGGCAAAACCAATCTGATGGAAGCCATCTATGTCCTTTCGATGGCAAAATCACACCGCA
CCTCAAATGACAAAGAACTTATACGGTGGGACGAAGACTATGCTAAAATAGAAGGAAGAGTGATGAAGCGCAACGGGGAC
ATCCCGATGCAGCTTGTCATCTCCAAAAAAGGTAAAAAGGGCAAGGTCAATCATATAGAGCAGCAAAAACTCAGTCAGTA
TGTCGGAGCGCTGAACACCATTATGTTTGCCCCTGAGGATTTAAATCTCGTCAAAGGAAGCCCTCAGGTGAGGAGAAGAT
TTCTCGATATGGAGATCGGGCAGGTTTCTGCCGTTTATCTGTATGATTTATCTCTTTATCAAAAAATCCTTTCACAGCGG
AATCATTTTCTGAAACAGCTGCAAAGCCGGAAACAGACTGACCGGACCATGCTTGACGTTCTCACTGATCAGCTGATTGA
AGCAGCCGCAAAAGTTGTCGCCAGACGTCTGCAGTTTACGGCGCAGCTTGAAAAATGGGCGCAGCCGATCCATTCCGGCA
TTTCCCGGGGAATTGAAGAACTGACGCTTAAGTATCACACGGCGCTTGATGTATCAGATCCCAAAGATTTGTCGAAAATA
GGTAACAGCTACCAGGAGTCTTTTTCGAAATTAAAAGAAAAAGAAATAGAACGAGGCGTCACATTATTCGGACCGCATCG
GGATGATGTCCTTTTTTATGTGAACGGACGCGATGTGCAGACTTACGGTTCGCAGGGACAGCAGCGTACGACGGCTTTGT
CTCTGAAGCTGGCTGAAATAGATTTGATTCATGAAGAAATCGGAGAATACCCCATTTTACTTTTGGATGATGTACTAAGC
GAGCTGGATGATTACCGACAGTCCCATTTGCTTCATACGATCCAAGGCCGTGTGCAGACATTTGTCACCACGACGAGCGT
GGATGGCATTGACCACGATACCTTACATCAAGCAGGAATGTTCCGTGTGGAAAACGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-346)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	94.054	100	0.941