Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ACBW56_RS11945 Genome accession   NZ_CP167196
Coordinates   2460750..2460914 (-) Length   54 a.a.
NCBI ID   WP_330729091.1    Uniprot ID   -
Organism   Bacillus velezensis strain FRI-TD24     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2455750..2465914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACBW56_RS11945 (ACBW56_11945) comS 2460750..2460914 (-) 165 WP_330729091.1 competence protein ComS Regulator
  ACBW56_RS11950 (ACBW56_11950) srfAB 2460979..2464023 (-) 3045 Protein_2347 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6206.22 Da        Isoelectric Point: 12.0559

>NTDB_id=1038780 ACBW56_RS11945 WP_330729091.1 2460750..2460914(-) (comS) [Bacillus velezensis strain FRI-TD24]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=1038780 ACBW56_RS11945 WP_330729091.1 2460750..2460914(-) (comS) [Bacillus velezensis strain FRI-TD24]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5

Multiple sequence alignment