Detailed information NTG1038767

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACBW56_RS08115
• Genome accession: NZ_CP167196
• Coordinates: 1722675..1723628 (-)
• Length: 317 a.a.
• NCBI ID: WP_003155063.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FRI-TD24
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1717675..1728628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACBW56_RS08085 (ACBW56_08085)	-	1717827..1718813 (-)	987	WP_003155054.1	ABC transporter ATP-binding protein	-
ACBW56_RS08090 (ACBW56_08090)	-	1718987..1719772 (-)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ACBW56_RS08095 (ACBW56_08095)	fabF	1719856..1721094 (-)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
ACBW56_RS08100 (ACBW56_08100)	-	1721117..1722055 (-)	939	WP_003155057.1	beta-ketoacyl-ACP synthase III	-
ACBW56_RS08105 (ACBW56_08105)	-	1722223..1722441 (+)	219	WP_003155059.1	hypothetical protein	-
ACBW56_RS08110 (ACBW56_08110)	comZ	1722471..1722662 (-)	192	WP_003155061.1	ComZ family protein	Regulator
ACBW56_RS08115 (ACBW56_08115)	med	1722675..1723628 (-)	954	WP_003155063.1	BMP family ABC transporter substrate-binding protein	Regulator
ACBW56_RS08120 (ACBW56_08120)	-	1723718..1724284 (-)	567	WP_003155065.1	hypothetical protein	-
ACBW56_RS08125 (ACBW56_08125)	-	1724367..1725101 (-)	735	WP_014304780.1	hypothetical protein	-
ACBW56_RS08130 (ACBW56_08130)	-	1725362..1725547 (+)	186	WP_003155069.1	YjzD family protein	-
ACBW56_RS08135 (ACBW56_08135)	-	1725583..1725762 (-)	180	WP_003155070.1	YjzC family protein	-
ACBW56_RS08140 (ACBW56_08140)	argF	1725838..1726809 (-)	972	WP_032857787.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35345.94 Da
• Isoelectric Point: 4.5594

>NTDB_id=1038767 ACBW56_RS08115 WP_003155063.1 1722675..1723628(-) (med) [Bacillus velezensis strain FRI-TD24]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1038767 ACBW56_RS08115 WP_003155063.1 1722675..1723628(-) (med) [Bacillus velezensis strain FRI-TD24]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785