Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACBW56_RS06760 Genome accession   NZ_CP167196
Coordinates   1472726..1473190 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain FRI-TD24     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1467726..1478190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACBW56_RS06735 (ACBW56_06735) - 1468240..1468785 (-) 546 Protein_1339 hypothetical protein -
  ACBW56_RS06740 (ACBW56_06740) fadH 1468895..1469659 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACBW56_RS06745 (ACBW56_06745) - 1469803..1470666 (+) 864 WP_095315361.1 metallophosphoesterase -
  ACBW56_RS06750 (ACBW56_06750) - 1470741..1471235 (+) 495 WP_088037173.1 L,D-transpeptidase family protein -
  ACBW56_RS06755 (ACBW56_06755) - 1471311..1472603 (+) 1293 WP_043867050.1 MFS transporter -
  ACBW56_RS06760 (ACBW56_06760) kre 1472726..1473190 (+) 465 WP_003154622.1 YkyB family protein Regulator
  ACBW56_RS06765 (ACBW56_06765) cheV 1473233..1474144 (-) 912 WP_014304917.1 chemotaxis protein CheV -
  ACBW56_RS06770 (ACBW56_06770) - 1474333..1474494 (+) 162 WP_007409608.1 hypothetical protein -
  ACBW56_RS06775 (ACBW56_06775) - 1474695..1475914 (+) 1220 Protein_1347 aminotransferase A -
  ACBW56_RS06780 (ACBW56_06780) - 1475890..1477710 (-) 1821 WP_015417363.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1038759 ACBW56_RS06760 WP_003154622.1 1472726..1473190(+) (kre) [Bacillus velezensis strain FRI-TD24]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1038759 ACBW56_RS06760 WP_003154622.1 1472726..1473190(+) (kre) [Bacillus velezensis strain FRI-TD24]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment