Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   QNH68_RS09125 Genome accession   NZ_OX352944
Coordinates   1893572..1894021 (-) Length   149 a.a.
NCBI ID   WP_012027921.1    Uniprot ID   G9CHX9
Organism   Streptococcus suis isolate 861160_LM_H     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1888572..1899021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH68_RS09105 - 1889007..1889538 (-) 532 Protein_1773 histidine phosphatase family protein -
  QNH68_RS09110 - 1889543..1889986 (-) 444 WP_074390173.1 dUTP diphosphatase -
  QNH68_RS09115 rcrQ 1890088..1891872 (-) 1785 WP_024417148.1 ABC transporter ATP-binding protein Regulator
  QNH68_RS09120 - 1891873..1893579 (-) 1707 WP_024417147.1 ABC transporter ATP-binding protein -
  QNH68_RS09125 rcrR 1893572..1894021 (-) 450 WP_012027921.1 MarR family transcriptional regulator Regulator
  QNH68_RS09130 - 1894243..1895259 (+) 1017 WP_024381196.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  QNH68_RS09135 galU 1895304..1896203 (+) 900 WP_004298345.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  QNH68_RS09140 - 1896221..1896898 (-) 678 WP_074390172.1 rhomboid family intramembrane serine protease -
  QNH68_RS09145 - 1896882..1897424 (-) 543 WP_024381198.1 5-formyltetrahydrofolate cyclo-ligase -
  QNH68_RS09150 - 1897465..1898592 (-) 1128 WP_024381199.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17284.90 Da        Isoelectric Point: 8.9142

>NTDB_id=1038176 QNH68_RS09125 WP_012027921.1 1893572..1894021(-) (rcrR) [Streptococcus suis isolate 861160_LM_H]
MGHTIADFRNLLNQIEQISETIAKEYDVEHLAGPQGWALRFIAERSEAETFVKDIEAELKISKSVASNLVKRMEKNGFIQ
VLPSKVDKRFKQLVLTEKGQGKICHLKAFHEEMHHSLFWGIQKEDFDLVKQVGNQLKVNIQRYKEKNHV

Nucleotide


Download         Length: 450 bp        

>NTDB_id=1038176 QNH68_RS09125 WP_012027921.1 1893572..1894021(-) (rcrR) [Streptococcus suis isolate 861160_LM_H]
ATGGGACATACTATTGCAGATTTTCGGAACTTGCTCAATCAGATTGAACAAATTAGTGAAACCATTGCAAAAGAATACGA
TGTGGAGCACTTGGCTGGTCCACAGGGCTGGGCCTTGCGCTTCATTGCGGAACGGTCGGAAGCCGAAACCTTTGTAAAAG
ATATAGAAGCGGAATTAAAGATTTCCAAATCGGTTGCCAGCAATCTGGTCAAGAGAATGGAGAAAAATGGCTTTATCCAA
GTCCTTCCCTCTAAGGTTGACAAACGCTTCAAACAGCTGGTTTTGACAGAGAAGGGACAAGGGAAGATATGTCACCTGAA
AGCTTTTCATGAAGAAATGCACCATTCACTTTTTTGGGGCATTCAAAAAGAGGACTTTGACTTGGTTAAACAGGTGGGCA
ATCAATTAAAAGTAAATATTCAACGCTATAAGGAGAAGAATCATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G9CHX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.662

95.302

0.416

Multiple sequence alignment