Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACB345_RS06480 Genome accession   NZ_CP167025
Coordinates   1311256..1311981 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain Isolate     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1306256..1316981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB345_RS06445 (ACB345_06445) rnpM 1306290..1306586 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ACB345_RS06450 (ACB345_06450) nusA 1306602..1307759 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  ACB345_RS06455 (ACB345_06455) rimP 1307934..1308470 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ACB345_RS06465 (ACB345_06465) trmB 1308729..1309364 (-) 636 WP_031488472.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB345_RS06470 (ACB345_06470) ccrZ 1309364..1310155 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB345_RS06475 (ACB345_06475) - 1310219..1311253 (-) 1035 WP_031577431.1 ABC transporter permease -
  ACB345_RS06480 (ACB345_06480) pptA 1311256..1311981 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB345_RS06485 (ACB345_06485) - 1312053..1312472 (+) 420 WP_002983376.1 HIT family protein -
  ACB345_RS06490 (ACB345_06490) - 1312469..1312825 (+) 357 WP_031488470.1 hypothetical protein -
  ACB345_RS06495 (ACB345_06495) - 1312936..1314219 (-) 1284 WP_031488469.1 LCP family protein -
  ACB345_RS06500 (ACB345_06500) - 1314228..1314752 (-) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  ACB345_RS06505 (ACB345_06505) tsaE 1314727..1315188 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACB345_RS06510 (ACB345_06510) - 1315342..1316802 (-) 1461 WP_031488467.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1038149 ACB345_RS06480 WP_002983379.1 1311256..1311981(-) (pptA) [Streptococcus pyogenes strain Isolate]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1038149 ACB345_RS06480 WP_002983379.1 1311256..1311981(-) (pptA) [Streptococcus pyogenes strain Isolate]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment