Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACB363_RS03215 Genome accession   NZ_CP167021
Coordinates   616308..617345 (+) Length   345 a.a.
NCBI ID   WP_002983824.1    Uniprot ID   A0A4U9C0Q7
Organism   Streptococcus pyogenes strain Isolate 5     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 611308..622345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB363_RS03190 (ACB363_03190) - 611572..612903 (+) 1332 WP_011054719.1 dipeptidase -
  ACB363_RS03195 (ACB363_03195) arcC 612923..613873 (+) 951 WP_011528820.1 carbamate kinase -
  ACB363_RS03200 (ACB363_03200) asnA 614186..615178 (+) 993 WP_002983817.1 aspartate--ammonia ligase -
  ACB363_RS03205 (ACB363_03205) rsmD 615301..615840 (+) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACB363_RS03210 (ACB363_03210) coaD 615830..616321 (+) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ACB363_RS03215 (ACB363_03215) sepM 616308..617345 (+) 1038 WP_002983824.1 SepM family pheromone-processing serine protease Regulator
  ACB363_RS03220 (ACB363_03220) - 617759..618736 (+) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  ACB363_RS03225 (ACB363_03225) - 619184..619804 (+) 621 WP_002992791.1 YutD family protein -
  ACB363_RS03230 (ACB363_03230) rlmN 619808..620887 (+) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACB363_RS03235 (ACB363_03235) - 620969..621596 (-) 628 Protein_587 prepilin peptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37555.27 Da        Isoelectric Point: 9.6692

>NTDB_id=1037912 ACB363_RS03215 WP_002983824.1 616308..617345(+) (sepM) [Streptococcus pyogenes strain Isolate 5]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTIQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1037912 ACB363_RS03215 WP_002983824.1 616308..617345(+) (sepM) [Streptococcus pyogenes strain Isolate 5]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGATTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9C0Q7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69


Multiple sequence alignment