Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACB327_RS02295 Genome accession   NZ_CP167020
Coordinates   433138..433947 (+) Length   269 a.a.
NCBI ID   WP_129322617.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 428138..438947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB327_RS02275 (ACB327_02275) - 428580..429827 (+) 1248 WP_129322615.1 AMP-binding protein -
  ACB327_RS02280 (ACB327_02280) - 429883..430917 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  ACB327_RS02285 (ACB327_02285) vicR 431079..431789 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ACB327_RS02290 (ACB327_02290) vicK 431782..433134 (+) 1353 WP_129322616.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACB327_RS02295 (ACB327_02295) vicX 433138..433947 (+) 810 WP_129322617.1 MBL fold metallo-hydrolase Regulator
  ACB327_RS02300 (ACB327_02300) rnc 434401..435093 (+) 693 WP_002985639.1 ribonuclease III -
  ACB327_RS02305 (ACB327_02305) smc 435094..438633 (+) 3540 WP_129322618.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30165.34 Da        Isoelectric Point: 5.7457

>NTDB_id=1037857 ACB327_RS02295 WP_129322617.1 433138..433947(+) (vicX) [Streptococcus pyogenes strain Isolate 6]
MSEIGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1037857 ACB327_RS02295 WP_129322617.1 433138..433947(+) (vicX) [Streptococcus pyogenes strain Isolate 6]
ATGAGTGAAATTGGTTTTAAATACAGTATTTTGGCATCCGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTAACCTTTGGAGATGTTGACATTGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment