Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   QNH74_RS05950 Genome accession   NZ_OX352806
Coordinates   1196651..1197133 (+) Length   160 a.a.
NCBI ID   WP_024388981.1    Uniprot ID   -
Organism   Streptococcus suis isolate 861160_dxerD_hsdSA     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1191651..1202133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH74_RS05925 - 1192900..1194210 (-) 1311 WP_002938090.1 GntP family permease -
  QNH74_RS05930 folK 1194260..1194748 (-) 489 WP_074390248.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  QNH74_RS05935 folB 1194745..1195107 (-) 363 WP_074390247.1 dihydroneopterin aldolase -
  QNH74_RS05940 folP 1195100..1195912 (-) 813 WP_074390246.1 dihydropteroate synthase -
  QNH74_RS05945 folE 1195921..1196484 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  QNH74_RS05950 mutX 1196651..1197133 (+) 483 WP_024388981.1 8-oxo-dGTP diphosphatase Machinery gene
  QNH74_RS05955 - 1197181..1197858 (-) 678 WP_074390245.1 DUF4956 domain-containing protein -
  QNH74_RS05960 - 1197845..1198588 (-) 744 WP_074390244.1 polyphosphate polymerase domain-containing protein -
  QNH74_RS05965 - 1198781..1199083 (+) 303 WP_024416545.1 hypothetical protein -
  QNH74_RS05970 - 1199104..1199370 (-) 267 WP_024413100.1 DUF2087 domain-containing protein -
  QNH74_RS05975 pheT 1199425..1201824 (-) 2400 WP_074390243.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18525.83 Da        Isoelectric Point: 4.4791

>NTDB_id=1037754 QNH74_RS05950 WP_024388981.1 1196651..1197133(+) (mutX) [Streptococcus suis isolate 861160_dxerD_hsdSA]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDNLLDYSVNFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1037754 QNH74_RS05950 WP_024388981.1 1196651..1197133(+) (mutX) [Streptococcus suis isolate 861160_dxerD_hsdSA]
ATGACCAAGAAACCCGTCCAACTCGCTACCATTTGCTACATTGATAATGGCAAGGAATTTCTCCTGCTCCATCGCAATAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGTAAACTAGAACCTGGTGAAACACCGCAAGCCTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAATGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACCTGGGAAGGGGACAGACATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGTTTCCGCTATGATGGGGATAACTTGCTGGATTACAGTGTTAATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.739

95.625

0.763

Multiple sequence alignment