Detailed information    

insolico Bioinformatically predicted

Overview


Name   treR   Type   Regulator
Locus tag   ACB337_RS08830 Genome accession   NZ_CP167017
Coordinates   1752740..1753453 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 9     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1747740..1758453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB337_RS08820 (ACB337_08825) treC 1748810..1750438 (-) 1629 WP_010922745.1 alpha,alpha-phosphotrehalase -
  ACB337_RS08825 (ACB337_08830) treP 1750505..1752529 (-) 2025 WP_010922746.1 PTS system trehalose-specific EIIBC component -
  ACB337_RS08830 (ACB337_08835) treR 1752740..1753453 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  ACB337_RS08835 (ACB337_08840) - 1753732..1754070 (-) 339 Protein_1680 winged helix-turn-helix transcriptional regulator -
  ACB337_RS08840 (ACB337_08845) - 1754257..1755114 (+) 858 WP_010922747.1 VOC family protein -
  ACB337_RS08845 (ACB337_08850) yaaA 1755156..1755887 (+) 732 WP_010922748.1 peroxide stress protein YaaA -
  ACB337_RS08850 (ACB337_08855) nrdG 1756061..1756675 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ACB337_RS08855 (ACB337_08860) - 1756675..1757184 (-) 510 WP_011285759.1 GNAT family N-acetyltransferase -
  ACB337_RS08860 (ACB337_08865) - 1757193..1758128 (-) 936 WP_010922750.1 Gfo/Idh/MocA family protein -
  ACB337_RS08865 (ACB337_08870) - 1758157..1758303 (-) 147 WP_002982210.1 hypothetical protein -

Sequence


Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=1037718 ACB337_RS08830 WP_002992823.1 1752740..1753453(+) (treR) [Streptococcus pyogenes strain Isolate 9]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1037718 ACB337_RS08830 WP_002992823.1 1752740..1753453(+) (treR) [Streptococcus pyogenes strain Isolate 9]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675


Multiple sequence alignment