Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACB332_RS05905 Genome accession   NZ_CP167016
Coordinates   1179087..1180124 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain Isolate 10     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1174087..1185124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB332_RS05885 (ACB332_05885) - 1174837..1175463 (+) 627 WP_002983834.1 A24 family peptidase -
  ACB332_RS05890 (ACB332_05890) rlmN 1175545..1176624 (-) 1080 WP_020905325.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACB332_RS05895 (ACB332_05895) - 1176628..1177248 (-) 621 WP_002992791.1 YutD family protein -
  ACB332_RS05900 (ACB332_05900) - 1177696..1178673 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  ACB332_RS05905 (ACB332_05905) sepM 1179087..1180124 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  ACB332_RS05910 (ACB332_05910) coaD 1180111..1180602 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ACB332_RS05915 (ACB332_05915) rsmD 1180592..1181131 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACB332_RS05920 (ACB332_05920) asnA 1181254..1182246 (-) 993 WP_020905328.1 aspartate--ammonia ligase -
  ACB332_RS05925 (ACB332_05925) arcC 1182559..1183509 (-) 951 WP_010922501.1 carbamate kinase -
  ACB332_RS05930 (ACB332_05930) - 1183529..1184860 (-) 1332 WP_011054719.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=1037650 ACB332_RS05905 WP_010922499.1 1179087..1180124(-) (sepM) [Streptococcus pyogenes strain Isolate 10]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1037650 ACB332_RS05905 WP_010922499.1 1179087..1180124(-) (sepM) [Streptococcus pyogenes strain Isolate 10]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGATGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment