Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACB351_RS09820 Genome accession   NZ_CP167015
Coordinates   1930605..1931381 (+) Length   258 a.a.
NCBI ID   WP_021340715.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 11     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1925605..1936381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB351_RS09800 (ACB351_09800) - 1927432..1928206 (-) 775 Protein_1869 IS30 family transposase -
  ACB351_RS09810 (ACB351_09810) rlmH 1928602..1929081 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACB351_RS09815 (ACB351_09815) htrA 1929293..1930516 (+) 1224 WP_011285340.1 S1C family serine protease Regulator
  ACB351_RS09820 (ACB351_09820) spo0J 1930605..1931381 (+) 777 WP_021340715.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29027.83 Da        Isoelectric Point: 10.2588

>NTDB_id=1037611 ACB351_RS09820 WP_021340715.1 1930605..1931381(+) (spo0J) [Streptococcus pyogenes strain Isolate 11]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1037611 ACB351_RS09820 WP_021340715.1 1930605..1931381(+) (spo0J) [Streptococcus pyogenes strain Isolate 11]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAACCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGTATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTACTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585


Multiple sequence alignment