Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACB351_RS06080 Genome accession   NZ_CP167015
Coordinates   1209912..1210949 (-) Length   345 a.a.
NCBI ID   WP_011284961.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 11     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1204912..1215949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB351_RS06055 (ACB351_06055) - 1204925..1205452 (-) 528 WP_002983837.1 Dps family protein -
  ACB351_RS06060 (ACB351_06060) - 1205680..1206306 (+) 627 WP_002983834.1 A24 family peptidase -
  ACB351_RS06065 (ACB351_06065) rlmN 1206388..1207448 (-) 1061 Protein_1150 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACB351_RS06070 (ACB351_06070) - 1207452..1208072 (-) 621 WP_002992791.1 YutD family protein -
  ACB351_RS06075 (ACB351_06075) - 1208520..1209497 (-) 978 WP_021341005.1 LacI family DNA-binding transcriptional regulator -
  ACB351_RS06080 (ACB351_06080) sepM 1209912..1210949 (-) 1038 WP_011284961.1 SepM family pheromone-processing serine protease Regulator
  ACB351_RS06085 (ACB351_06085) coaD 1210936..1211427 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ACB351_RS06090 (ACB351_06090) rsmD 1211417..1211956 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACB351_RS06095 (ACB351_06095) asnA 1212079..1213071 (-) 993 WP_002983817.1 aspartate--ammonia ligase -
  ACB351_RS06100 (ACB351_06100) arcC 1213384..1214334 (-) 951 WP_009880962.1 carbamate kinase -
  ACB351_RS06105 (ACB351_06105) - 1214354..1215685 (-) 1332 WP_011284962.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37571.27 Da        Isoelectric Point: 9.6692

>NTDB_id=1037592 ACB351_RS06080 WP_011284961.1 1209912..1210949(-) (sepM) [Streptococcus pyogenes strain Isolate 11]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDTDFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1037592 ACB351_RS06080 WP_011284961.1 1209912..1210949(-) (sepM) [Streptococcus pyogenes strain Isolate 11]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATACTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69


Multiple sequence alignment