Detailed information
Bioinformatically predicted
Overview
| Name | cipB | Type | Regulator |
| Locus tag | AD178_RS02885 | Genome accession | NZ_OX244288 |
| Coordinates | 556223..556372 (+) | Length | 49 a.a. |
| NCBI ID | WP_001818346.1 | Uniprot ID | Q9FBH1 |
| Organism | Streptococcus pneumoniae strain PT8105 isolate 2RLC4 | ||
| Function | indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation |
||
Genomic Context
Location: 551223..561372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD178_RS02860 (SAMEA1463109_00573) | - | 552825..553028 (+) | 204 | WP_001093272.1 | bacteriocin class II family protein | - |
| AD178_RS02865 (SAMEA1463109_00574) | - | 553346..553549 (+) | 204 | WP_000411016.1 | hypothetical protein | - |
| AD178_RS02870 | - | 554552..555356 (+) | 805 | Protein_566 | IS5 family transposase | - |
| AD178_RS02875 (SAMEA1463109_00578) | blpM | 555506..555760 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| AD178_RS02880 (SAMEA1463109_00579) | blpN | 555776..555979 (+) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
| AD178_RS02885 (SAMEA1463109_00580) | cipB | 556223..556372 (+) | 150 | WP_001818346.1 | bacteriocin-like peptide BlpO | Regulator |
| AD178_RS02890 | - | 556476..556595 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
| AD178_RS02895 (SAMEA1463109_00581) | - | 557381..557764 (+) | 384 | WP_000877381.1 | hypothetical protein | - |
| AD178_RS02900 (SAMEA1463109_00582) | - | 557816..558505 (+) | 690 | WP_000760529.1 | CPBP family intramembrane glutamic endopeptidase | - |
| AD178_RS02905 (SAMEA1463109_00583) | blpZ | 558547..558795 (+) | 249 | WP_000276499.1 | immunity protein BlpZ | - |
| AD178_RS02910 (SAMEA1463109_00584) | - | 558825..559436 (+) | 612 | WP_000394045.1 | type II CAAX endopeptidase family protein | - |
| AD178_RS02915 (SAMEA1463109_00585) | ccrZ | 559597..560391 (+) | 795 | WP_000363002.1 | cell cycle regulator CcrZ | - |
| AD178_RS02920 (SAMEA1463109_00586) | trmB | 560388..561023 (+) | 636 | WP_001266077.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
Sequence
Protein
Download Length: 49 a.a. Molecular weight: 5134.91 Da Isoelectric Point: 3.9133
>NTDB_id=1037515 AD178_RS02885 WP_001818346.1 556223..556372(+) (cipB) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
MDTKMMSQFAVMDNEMLACVEGGDIDWGRKISCAAGVAYGAIDGCATTV
MDTKMMSQFAVMDNEMLACVEGGDIDWGRKISCAAGVAYGAIDGCATTV
Nucleotide
Download Length: 150 bp
>NTDB_id=1037515 AD178_RS02885 WP_001818346.1 556223..556372(+) (cipB) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
ATGGATACAAAAATGATGTCACAATTTGCAGTTATGGATAATGAAATGCTTGCTTGCGTTGAAGGTGGAGATATTGATTG
GGGAAGAAAAATTAGTTGTGCAGCAGGGGTTGCATATGGCGCAATTGATGGGTGTGCAACAACGGTTTGA
ATGGATACAAAAATGATGTCACAATTTGCAGTTATGGATAATGAAATGCTTGCTTGCGTTGAAGGTGGAGATATTGATTG
GGGAAGAAAAATTAGTTGTGCAGCAGGGGTTGCATATGGCGCAATTGATGGGTGTGCAACAACGGTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cipB | Streptococcus mutans UA159 |
51.02 |
100 |
0.51 |