Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACB352_RS07560 Genome accession   NZ_CP167009
Coordinates   1476735..1477544 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 22     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1471735..1482544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB352_RS07550 (ACB352_07550) smc 1472070..1475609 (-) 3540 WP_011284597.1 chromosome segregation protein SMC -
  ACB352_RS07555 (ACB352_07555) rnc 1475610..1476302 (-) 693 WP_011284596.1 ribonuclease III -
  ACB352_RS07560 (ACB352_07560) vicX 1476735..1477544 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  ACB352_RS07565 (ACB352_07565) vicK 1477548..1478900 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACB352_RS07570 (ACB352_07570) vicR 1478893..1479603 (-) 711 WP_002985645.1 response regulator YycF Regulator
  ACB352_RS07575 (ACB352_07575) - 1479765..1480799 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  ACB352_RS07580 (ACB352_07580) - 1480855..1482102 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1037324 ACB352_RS07560 WP_002985641.1 1476735..1477544(-) (vicX) [Streptococcus pyogenes strain Isolate 22]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1037324 ACB352_RS07560 WP_002985641.1 1476735..1477544(-) (vicX) [Streptococcus pyogenes strain Isolate 22]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment