Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACB360_RS05545 Genome accession   NZ_CP167006
Coordinates   1127685..1128722 (-) Length   345 a.a.
NCBI ID   WP_002989068.1    Uniprot ID   Q1JKX2
Organism   Streptococcus pyogenes strain Isolate 26     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1122685..1133722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB360_RS05520 (ACB360_05520) - 1122689..1123216 (-) 528 WP_002983837.1 Dps family protein -
  ACB360_RS05525 (ACB360_05525) - 1123444..1124070 (+) 627 WP_002989076.1 A24 family peptidase -
  ACB360_RS05530 (ACB360_05530) rlmN 1124152..1125231 (-) 1080 WP_002989074.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACB360_RS05535 (ACB360_05535) - 1125235..1125855 (-) 621 WP_032461520.1 YutD family protein -
  ACB360_RS05540 (ACB360_05540) - 1126303..1127280 (-) 978 WP_002989070.1 LacI family DNA-binding transcriptional regulator -
  ACB360_RS05545 (ACB360_05545) sepM 1127685..1128722 (-) 1038 WP_002989068.1 SepM family pheromone-processing serine protease Regulator
  ACB360_RS05550 (ACB360_05550) coaD 1128709..1129200 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ACB360_RS05555 (ACB360_05555) rsmD 1129190..1129729 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACB360_RS05560 (ACB360_05560) asnA 1129852..1130844 (-) 993 WP_002983817.1 aspartate--ammonia ligase -
  ACB360_RS05565 (ACB360_05565) arcC 1131158..1132108 (-) 951 WP_002989065.1 carbamate kinase -
  ACB360_RS05570 (ACB360_05570) - 1132128..1133459 (-) 1332 WP_002989063.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37527.17 Da        Isoelectric Point: 9.5788

>NTDB_id=1037157 ACB360_RS05545 WP_002989068.1 1127685..1128722(-) (sepM) [Streptococcus pyogenes strain Isolate 26]
MKRLNKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1037157 ACB360_RS05545 WP_002989068.1 1127685..1128722(-) (sepM) [Streptococcus pyogenes strain Isolate 26]
ATGAAAAGACTTAACAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q1JKX2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69


Multiple sequence alignment