Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACB340_RS09020 Genome accession   NZ_CP167005
Coordinates   1805216..1805929 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain Isolate 27     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1800216..1810929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB340_RS09010 (ACB340_09010) treC 1801286..1802914 (-) 1629 WP_023079166.1 alpha,alpha-phosphotrehalase -
  ACB340_RS09015 (ACB340_09015) treP 1802981..1805005 (-) 2025 WP_115224668.1 PTS system trehalose-specific EIIBC component -
  ACB340_RS09020 (ACB340_09020) treR 1805216..1805929 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  ACB340_RS09025 (ACB340_09025) - 1806208..1806534 (-) 327 WP_023079196.1 helix-turn-helix domain-containing protein -
  ACB340_RS09030 (ACB340_09030) - 1806720..1807577 (+) 858 WP_023079153.1 VOC family protein -
  ACB340_RS09035 (ACB340_09035) yaaA 1807619..1808350 (+) 732 WP_023079177.1 peroxide stress protein YaaA -
  ACB340_RS09040 (ACB340_09040) nrdG 1808524..1809138 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ACB340_RS09045 (ACB340_09045) - 1809138..1809647 (-) 510 WP_023079186.1 GNAT family N-acetyltransferase -
  ACB340_RS09050 (ACB340_09050) - 1809656..1810591 (-) 936 WP_010922750.1 Gfo/Idh/MocA family protein -
  ACB340_RS09055 (ACB340_09055) - 1810620..1810766 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1037116 ACB340_RS09020 WP_002982243.1 1805216..1805929(+) (treR) [Streptococcus pyogenes strain Isolate 27]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1037116 ACB340_RS09020 WP_002982243.1 1805216..1805929(+) (treR) [Streptococcus pyogenes strain Isolate 27]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTTAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment