Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACB340_RS02415 Genome accession   NZ_CP167005
Coordinates   444723..445532 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 27     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 439723..450532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB340_RS02395 (ACB340_02395) - 440165..441412 (+) 1248 WP_115224553.1 AMP-binding protein -
  ACB340_RS02400 (ACB340_02400) - 441468..442502 (+) 1035 WP_011528375.1 DUF3114 domain-containing protein -
  ACB340_RS02405 (ACB340_02405) vicR 442664..443374 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ACB340_RS02410 (ACB340_02410) vicK 443367..444719 (+) 1353 WP_023078748.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACB340_RS02415 (ACB340_02415) vicX 444723..445532 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  ACB340_RS02420 (ACB340_02420) rnc 445975..446667 (+) 693 WP_002990670.1 ribonuclease III -
  ACB340_RS02425 (ACB340_02425) smc 446668..450207 (+) 3540 WP_371395060.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1037090 ACB340_RS02415 WP_002985641.1 444723..445532(+) (vicX) [Streptococcus pyogenes strain Isolate 27]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1037090 ACB340_RS02415 WP_002985641.1 444723..445532(+) (vicX) [Streptococcus pyogenes strain Isolate 27]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment