Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACB354_RS09360 Genome accession   NZ_CP167004
Coordinates   1804843..1805556 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain Isolate 28     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1799843..1810556
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB354_RS09350 (ACB354_09355) treC 1800913..1802541 (-) 1629 WP_011185052.1 alpha,alpha-phosphotrehalase -
  ACB354_RS09355 (ACB354_09360) treP 1802608..1804632 (-) 2025 WP_159328644.1 PTS system trehalose-specific EIIBC component -
  ACB354_RS09360 (ACB354_09365) treR 1804843..1805556 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  ACB354_RS09365 (ACB354_09370) - 1805835..1806161 (-) 327 WP_011185054.1 helix-turn-helix domain-containing protein -
  ACB354_RS09370 (ACB354_09375) - 1806347..1807195 (+) 849 Protein_1787 VOC family protein -
  ACB354_RS09375 (ACB354_09380) yaaA 1807237..1807968 (+) 732 WP_011185056.1 peroxide stress protein YaaA -
  ACB354_RS09380 (ACB354_09385) nrdG 1808142..1808756 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ACB354_RS09385 (ACB354_09390) - 1808756..1809265 (-) 510 WP_011185058.1 GNAT family N-acetyltransferase -
  ACB354_RS09390 (ACB354_09395) - 1809274..1810209 (-) 936 WP_002992828.1 Gfo/Idh/MocA family protein -
  ACB354_RS09395 (ACB354_09400) - 1810238..1810384 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1037061 ACB354_RS09360 WP_002982243.1 1804843..1805556(+) (treR) [Streptococcus pyogenes strain Isolate 28]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1037061 ACB354_RS09360 WP_002982243.1 1804843..1805556(+) (treR) [Streptococcus pyogenes strain Isolate 28]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment