Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACB348_RS02650 Genome accession   NZ_CP167002
Coordinates   478499..479224 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain Isolate 30     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 473499..484224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB348_RS02620 (ACB348_02620) - 473687..475147 (+) 1461 WP_136076179.1 NCS2 family permease -
  ACB348_RS02625 (ACB348_02625) tsaE 475301..475762 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACB348_RS02630 (ACB348_02630) - 475737..476261 (+) 525 WP_111704937.1 GNAT family N-acetyltransferase -
  ACB348_RS02635 (ACB348_02635) - 476270..477544 (+) 1275 WP_020837594.1 LCP family protein -
  ACB348_RS02640 (ACB348_02640) - 477655..478011 (-) 357 WP_009880754.1 hypothetical protein -
  ACB348_RS02645 (ACB348_02645) - 478008..478427 (-) 420 WP_002983376.1 HIT family protein -
  ACB348_RS02650 (ACB348_02650) pptA 478499..479224 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB348_RS02655 (ACB348_02655) - 479227..480261 (+) 1035 WP_010922583.1 ABC transporter permease -
  ACB348_RS02660 (ACB348_02660) ccrZ 480325..481116 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB348_RS02665 (ACB348_02665) trmB 481116..481751 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB348_RS02675 (ACB348_02675) rimP 482010..482546 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  ACB348_RS02680 (ACB348_02680) nusA 482721..483878 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  ACB348_RS02685 (ACB348_02685) rnpM 483894..484190 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1036917 ACB348_RS02650 WP_002983379.1 478499..479224(+) (pptA) [Streptococcus pyogenes strain Isolate 30]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1036917 ACB348_RS02650 WP_002983379.1 478499..479224(+) (pptA) [Streptococcus pyogenes strain Isolate 30]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment