Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACB350_RS06500 Genome accession   NZ_CP166999
Coordinates   1255096..1256133 (-) Length   345 a.a.
NCBI ID   WP_129304106.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 34     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1250096..1261133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB350_RS06480 (ACB350_06480) - 1250846..1251472 (+) 627 WP_002989076.1 A24 family peptidase -
  ACB350_RS06485 (ACB350_06485) rlmN 1251554..1252634 (-) 1081 Protein_1234 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACB350_RS06490 (ACB350_06490) - 1252638..1253258 (-) 621 WP_002992791.1 YutD family protein -
  ACB350_RS06495 (ACB350_06495) - 1253706..1254682 (-) 977 Protein_1236 LacI family DNA-binding transcriptional regulator -
  ACB350_RS06500 (ACB350_06500) sepM 1255096..1256133 (-) 1038 WP_129304106.1 SepM family pheromone-processing serine protease Regulator
  ACB350_RS06505 (ACB350_06505) coaD 1256120..1256611 (-) 492 WP_030127407.1 pantetheine-phosphate adenylyltransferase -
  ACB350_RS06510 (ACB350_06510) rsmD 1256601..1257140 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACB350_RS06515 (ACB350_06515) asnA 1257263..1258255 (-) 993 WP_002983817.1 aspartate--ammonia ligase -
  ACB350_RS06520 (ACB350_06520) arcC 1258568..1259518 (-) 951 WP_010922501.1 carbamate kinase -
  ACB350_RS06525 (ACB350_06525) - 1259538..1260869 (-) 1332 WP_011054719.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37554.29 Da        Isoelectric Point: 9.7537

>NTDB_id=1036767 ACB350_RS06500 WP_129304106.1 1255096..1256133(-) (sepM) [Streptococcus pyogenes strain Isolate 34]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAENTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTIQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1036767 ACB350_RS06500 WP_129304106.1 1255096..1256133(-) (sepM) [Streptococcus pyogenes strain Isolate 34]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAAATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGGAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGATTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGTGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69


Multiple sequence alignment