Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACB356_RS06940 Genome accession   NZ_CP166998
Coordinates   1381581..1382306 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain Isolate 35     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1376581..1387306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB356_RS06905 (ACB356_06905) - 1376715..1377098 (+) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  ACB356_RS06910 (ACB356_06910) - 1377109..1377660 (+) 552 WP_002988670.1 hypothetical protein -
  ACB356_RS06915 (ACB356_06915) - 1377777..1378856 (+) 1080 WP_002988667.1 site-specific integrase -
  ACB356_RS06925 (ACB356_06925) trmB 1379054..1379689 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB356_RS06930 (ACB356_06930) ccrZ 1379689..1380480 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB356_RS06935 (ACB356_06935) - 1380544..1381578 (-) 1035 WP_002988663.1 ABC transporter permease -
  ACB356_RS06940 (ACB356_06940) pptA 1381581..1382306 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB356_RS06945 (ACB356_06945) - 1382378..1382797 (+) 420 WP_002988659.1 HIT family protein -
  ACB356_RS06950 (ACB356_06950) - 1382794..1383150 (+) 357 WP_002988657.1 hypothetical protein -
  ACB356_RS06955 (ACB356_06955) - 1383261..1384541 (-) 1281 WP_002988654.1 LCP family protein -
  ACB356_RS06960 (ACB356_06960) - 1384550..1385074 (-) 525 WP_002988650.1 GNAT family N-acetyltransferase -
  ACB356_RS06965 (ACB356_06965) tsaE 1385049..1385510 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACB356_RS06970 (ACB356_06970) - 1385664..1387124 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1036719 ACB356_RS06940 WP_002983379.1 1381581..1382306(-) (pptA) [Streptococcus pyogenes strain Isolate 35]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1036719 ACB356_RS06940 WP_002983379.1 1381581..1382306(-) (pptA) [Streptococcus pyogenes strain Isolate 35]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment