Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACAF59_RS16215 Genome accession   NZ_CP166985
Coordinates   3339317..3339940 (-) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain 2023CK-01295     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3334317..3344940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAF59_RS16200 (ACAF59_16190) helD 3334552..3336606 (-) 2055 WP_020079237.1 DNA helicase IV -
  ACAF59_RS16205 (ACAF59_16195) - 3336730..3337176 (+) 447 WP_045362306.1 YccF domain-containing protein -
  ACAF59_RS16210 (ACAF59_16200) yccS 3337194..3339329 (+) 2136 WP_020079239.1 YccS family putative transporter -
  ACAF59_RS16215 (ACAF59_16205) sxy/tfoX 3339317..3339940 (-) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  ACAF59_RS16220 (ACAF59_16210) sulA 3340390..3340899 (+) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  ACAF59_RS16225 (ACAF59_16215) ompA 3341252..3342304 (+) 1053 WP_026612358.1 porin OmpA -
  ACAF59_RS16230 (ACAF59_16220) matP 3342396..3342848 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  ACAF59_RS16235 (ACAF59_16225) - 3343034..3344791 (+) 1758 WP_032711302.1 Lon protease family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=1036596 ACAF59_RS16215 WP_026612357.1 3339317..3339940(-) (sxy/tfoX) [Klebsiella aerogenes strain 2023CK-01295]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=1036596 ACAF59_RS16215 WP_026612357.1 3339317..3339940(-) (sxy/tfoX) [Klebsiella aerogenes strain 2023CK-01295]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment