Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   MMH06_RS07545 Genome accession   NZ_OV904788
Coordinates   1433554..1433820 (+) Length   88 a.a.
NCBI ID   WP_001814186.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain RMV7 isolate RMV7domi     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1428554..1438820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMH06_RS07525 (IONPJBJN_01481) - 1428818..1429327 (+) 510 WP_000619939.1 N-acetyltransferase -
  MMH06_RS07530 (IONPJBJN_01482) pheT 1429404..1431809 (+) 2406 WP_054381418.1 phenylalanine--tRNA ligase subunit beta -
  MMH06_RS07535 (IONPJBJN_01483) - 1431877..1432878 (-) 1002 WP_000597984.1 endonuclease/exonuclease/phosphatase family protein -
  MMH06_RS07540 - 1433025..1433428 (+) 404 Protein_1448 helix-turn-helix domain-containing protein -
  MMH06_RS07545 HI0659 1433554..1433820 (+) 267 WP_001814186.1 helix-turn-helix transcriptional regulator Machinery gene
  MMH06_RS07550 (IONPJBJN_01485) metE 1434081..1436330 (+) 2250 WP_000108216.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  MMH06_RS07555 (IONPJBJN_01486) metF 1436394..1437260 (+) 867 WP_001277841.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9641.11 Da        Isoelectric Point: 4.2720

>NTDB_id=1035882 MMH06_RS07545 WP_001814186.1 1433554..1433820(+) (HI0659) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=1035882 MMH06_RS07545 WP_001814186.1 1433554..1433820(+) (HI0659) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

55.844

87.5

0.489