Detailed information NTG1035692

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LSO75_RS02615
• Genome accession: NZ_OV040584
• Coordinates: 519366..520364 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae isolate KR271
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 514366..525364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSO75_RS02590 (KRLU271_LOCUS480)	tehA	515334..516278 (+)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
LSO75_RS02595 (KRLU271_LOCUS481)	tsaA	516331..517050 (-)	720	WP_011272092.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
LSO75_RS02600 (KRLU271_LOCUS482)	menA	517112..518029 (+)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
LSO75_RS02605 (KRLU271_LOCUS483)	rraA	518081..518569 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
LSO75_RS02610 (KRLU271_LOCUS484)	-	518709..519260 (-)	552	WP_005649445.1	TIGR00645 family protein	-
LSO75_RS02615 (KRLU271_LOCUS485)	cytR	519366..520364 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
LSO75_RS02620 (KRLU271_LOCUS486)	rbsK	520392..521312 (-)	921	WP_011272090.1	ribokinase	-
LSO75_RS02625 (KRLU271_LOCUS487)	rbsB	521410..522288 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
LSO75_RS02630 (KRLU271_LOCUS488)	rbsC	522308..523276 (-)	969	WP_044364743.1	ribose ABC transporter permease	-
LSO75_RS02635 (KRLU271_LOCUS489)	rbsA	523292..524773 (-)	1482	WP_038440554.1	ribose ABC transporter ATP-binding protein RbsA	-
LSO75_RS02640 (KRLU271_LOCUS490)	rbsD	524787..525206 (-)	420	WP_005693672.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=1035692 LSO75_RS02615 WP_005659739.1 519366..520364(-) (cytR) [Haemophilus influenzae isolate KR271]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=1035692 LSO75_RS02615 WP_005659739.1 519366..520364(-) (cytR) [Haemophilus influenzae isolate KR271]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361