Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AB3239_RS13335 | Genome accession | NZ_CP166831 |
| Coordinates | 2559091..2560128 (-) | Length | 345 a.a. |
| NCBI ID | WP_038829731.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain TE3T-UV25 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2554091..2565128
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3239_RS13285 (AB3239_13285) | tasA | 2554188..2554973 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| AB3239_RS13290 (AB3239_13290) | sipW | 2555038..2555610 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| AB3239_RS13295 (AB3239_13295) | tapA | 2555594..2556355 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AB3239_RS13300 (AB3239_13300) | yqzG | 2556626..2556952 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| AB3239_RS13305 (AB3239_13305) | spoIITA | 2556994..2557173 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| AB3239_RS13310 (AB3239_13310) | comGG | 2557245..2557619 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| AB3239_RS13315 (AB3239_13315) | comGF | 2557620..2558003 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| AB3239_RS13320 (AB3239_13320) | comGE | 2558029..2558376 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| AB3239_RS13325 (AB3239_13325) | comGD | 2558360..2558791 (-) | 432 | WP_038829732.1 | comG operon protein ComGD | Machinery gene |
| AB3239_RS13330 (AB3239_13330) | comGC | 2558781..2559077 (-) | 297 | WP_024573391.1 | comG operon protein ComGC | Machinery gene |
| AB3239_RS13335 (AB3239_13335) | comGB | 2559091..2560128 (-) | 1038 | WP_038829731.1 | comG operon protein ComGB | Machinery gene |
| AB3239_RS13340 (AB3239_13340) | comGA | 2560115..2561185 (-) | 1071 | WP_032726161.1 | competence protein ComGA | Machinery gene |
| AB3239_RS13345 (AB3239_13345) | - | 2561397..2561594 (-) | 198 | WP_032726162.1 | hypothetical protein | - |
| AB3239_RS13350 (AB3239_13350) | corA | 2561596..2562549 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| AB3239_RS13355 (AB3239_13355) | yqhB | 2562692..2564020 (+) | 1329 | WP_021480026.1 | hemolysin family protein | - |
| AB3239_RS13360 (AB3239_13360) | rsbRD | 2564073..2564909 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39764.19 Da Isoelectric Point: 9.6257
>NTDB_id=1035537 AB3239_RS13335 WP_038829731.1 2559091..2560128(-) (comGB) [Bacillus subtilis strain TE3T-UV25]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKIISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKIISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1035537 AB3239_RS13335 WP_038829731.1 2559091..2560128(-) (comGB) [Bacillus subtilis strain TE3T-UV25]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAACTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAATCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAACTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAATCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.762 |
93.623 |
0.925 |