Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AB3239_RS01980 Genome accession   NZ_CP166831
Coordinates   381042..381182 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain TE3T-UV25     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 376042..386182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3239_RS01975 (AB3239_01975) srfAB 377906..380998 (+) 3093 Protein_345 surfactin non-ribosomal peptide synthetase SrfAB -
  AB3239_RS01980 (AB3239_01980) comS 381042..381182 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=1035499 AB3239_RS01980 WP_010886404.1 381042..381182(+) (comS) [Bacillus subtilis strain TE3T-UV25]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1035499 AB3239_RS01980 WP_010886404.1 381042..381182(+) (comS) [Bacillus subtilis strain TE3T-UV25]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment