Detailed information NTG1035462

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OAM_RS15255
• Genome accession: NZ_CP166824
• Coordinates: 3384348..3385352 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus ZF14
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3379348..3390352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OAM_RS15240 (OAM_015240)	-	3379734..3381023 (-)	1290	WP_016790179.1	malic enzyme-like NAD(P)-binding protein	-
OAM_RS15245 (OAM_015245)	rpmE	3381356..3381574 (-)	219	WP_004737142.1	50S ribosomal protein L31	-
OAM_RS15250 (OAM_015250)	priA	3381906..3384107 (+)	2202	WP_010435346.1	primosomal protein N'	-
OAM_RS15255 (OAM_015255)	cytR	3384348..3385352 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
OAM_RS15260 (OAM_015260)	-	3385475..3386014 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
OAM_RS15265 (OAM_015265)	hslV	3386221..3386769 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
OAM_RS15270 (OAM_015270)	hslU	3386828..3388168 (+)	1341	WP_010435356.1	HslU--HslV peptidase ATPase subunit	-
OAM_RS15275 (OAM_015275)	-	3388324..3389241 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OAM_RS15280 (OAM_015280)	rraA	3389315..3389833 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
OAM_RS15285 (OAM_015285)	zapB	3389940..3390182 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1035462 OAM_RS15255 WP_010435348.1 3384348..3385352(+) (cytR) [Vibrio cyclitrophicus ZF14]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1035462 OAM_RS15255 WP_010435348.1 3384348..3385352(+) (cytR) [Vibrio cyclitrophicus ZF14]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874